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Job DescriptionP34211
Confidence98.94%DateThu Jan 5 11:53:05 GMT 2012
Rank132Aligned Residues270
% Identity16%Templatec3c5wP_
PDB info PDB header:hydrolaseChain: P: PDB Molecule:pp2a-specific methylesterase pme-1; PDBTitle: complex between pp2a-specific methylesterase pme-1 and pp2a core2 enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120.... .....130.........140.
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Query Sequence  YTDTGKDVSDENIPLVRLAMTKLPAKSKRKGSVIIISGGPGLPGINPYINFDWPVTNLRES. . WDIIGFDPRGVGQSFPA
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Template Sequence  FESMEDVEVENETGKDTFRVYKSGSEGP. . . VLLLLHGGGHSALS. . . . . WAVFTAAIISRVQCRIVALDLRSHGETKVK
Template Known Secondary structure 
S


SS



SSS
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TT

GGG.....GTT


TTSTT
B
S
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   50.........60.........70....... ..80.........90. ........100.........110.........120.
 
   142.......150.........160.........170.........180.........190.........200.........210......... 220
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Query Sequence  INCQQSNQERLVNVSEKQLILQKINACIHNTGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQIAALYAER. F
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Template Sequence  NP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHAMGGAIAVHTASSNL
Template Known Secondary structure 

...............................S


TSSS


TT
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   122. ......130.........140.........150.........160.........170
 
   221........230.........240.........250.........260.........270.........280.........290.........300
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Query Sequence  PSSIRSIVFDGVVDIDDLNDNFSWKLRQAHSYQETFDRFAAWCARTKSCPLSSDRNQAIHQFHQLLLKLHNSPLTDSRGE
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Template Sequence  VPSLLGLCMIDV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VEGTAMDALNSMQNFLRGRPK. . . . . T
Template Known Secondary structure 
TTS
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TTS
S.....
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   171........180.. .......190.........200... .
 
   301........310.........320.........330.........340.........350.........360.........370.........380
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Query Sequence  SISSDDLISLTTELLLWRSSWPTLATAVRQFSQGIVSNEIETALNSSIASEKVSDALGVILCVDQSDEQLSQEQRKSRKK
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Template Sequence  FKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCKPYTWRIELAKTEKYWDGWFRGLSNLFL. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
TS
S
GGGT


SS
GGGGGGGTT..................
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   205....210.........220.........230.........240.........250.........260......
 
   381........390.........400.........410.........420.........430.........440......... 450.........
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Query Sequence  ALADAFPAVNFEREQSDLPEFCELWPIHRDLQQTRLKNTVLPSGLLFVAHKYDPTTPWINARKMADKFS. APLLTINGDG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SCPIPKLLLLAGVDRLDKD. . . LTIGQMQGKFQMQVLPQCG
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S
S
GGG

...TT
S
TT

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   311........320......... 330.........340........
 
   460.........470.........
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Query Sequence  HTLALAGTNLCVDEAVVRHL
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Template Sequence  HAVHEDA. PDKVAEAVATFL
Template Known Secondary structure  S

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   349350..... ....360.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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