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Job DescriptionP34211
Confidence99.61%DateThu Jan 5 11:53:05 GMT 2012
Rank29Aligned Residues275
% Identity19%Templatec3bwxA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha/beta hydrolase; PDBTitle: crystal structure of an alpha/beta hydrolase (yp_496220.1) from2 novosphingobium aromaticivorans dsm 12444 at 1.50 a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120.........130.........140...
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Query Sequence  YTDTGKDVSDENIPLVRLAMTKLPAKSKRKGSVIIISGGPGLPGINPYINFDWPVTNLRESWDIIGFDPRGVGQSFPAIN
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Template Sequence  WTSSDG. . . . . . . . . LRLHFRAYEGDISRP. PVLCLPGLTRNARD. . . . . FEDLATRLAGDWRVLCPEXRGRGDSDYA. .
Template Known Secondary structure 
TTS.........

B
TTS
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TT

GGG.....GBBTB


TTBTTS


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   910.... .....20......... 30.........40... ......50.........60.........70.
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  CQQSNQERLVNVSEKQLILQKINACIHNTGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQIAALYAERFPSS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDPXTYQPXQYLQDLEALLAQEGIERFVAIGTSLGGLLTXLLAAANPAR
Template Known Secondary structure  ...............................SSGGG
ST

ST
GGG
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   72.......80.........90.........100.........110.........120
 
   224.....230.........240.........250.........260.........270.........280.........290.........300...
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Query Sequence  IRSIVFDGVVDIDDLNDNFSWKLRQAHSYQETFDRFAAWCARTKSCPLSSDRNQAIHQFHQLLLKLHNSPLTDSRGESIS
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Template Sequence  IAAAVLNDVGPEVSPEGLERIRG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

SS

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   121........130.........140...
 
   304.....310.........320.........330.........340.........350.........360.........370.........380...
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Query Sequence  SDDLISLTTELLLWRSSWPTLATAVRQFSQGIVSNEIETALNSSIASEKVSDALGVILCVDQSDEQLSQEQRKSRKKALA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YVGQGRNFETWXHAARALQESSGDVYPDWDITQWLRYAKRIXVL
Template Known Secondary structure  ....................................TT


SSTTTSTT

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   144.....150.........160.........170.........180.......
 
   384.....390.........400.........410.........420.........430.........440.........450.........460...
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Query Sequence  DAFPAVNFEREQSDLPEFCELWPIHRDLQQTRLKNTVLPSGLLFVAHKYDPTTPWINARKMADKFSAPLLTINGDGHTLA
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Template Conservation                                          
 
 
 
  
                     
   

   
Template Sequence  GSSGRIAFDYDXKIAEPFEAPVGATPQVDXWPLFDALATRPLLVLRGETSDILSAQTAAKXASRPGVELVTLPRIGHAPT
Template Known Secondary structure 
TTS
SB
GGGG

TTS
TT


SS

TTS
TT
SSS
TSTTTT

S


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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   464.....470.........480.
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Query Sequence  LAGTNLCVDEAVVRHLLF
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Template Sequence  LDEP. ESIA. AIGRLLER
Template Known Secondary structure  S
S..TT
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   268.270. .... ....280...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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