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Job DescriptionP34211
Confidence99.55%DateThu Jan 5 11:53:05 GMT 2012
Rank40Aligned Residues261
% Identity11%Templatec2xt0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloalkane dehalogenase; PDBTitle: dehalogenase dppa from plesiocystis pacifica sir-i
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.... .....130.........140.........150.......
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Query Sequence  VRLAMTKLPAKSKRKGSVIIISGGPGLPGINPYINFDWPVTNLRES. WDIIGFDPRGVGQSFPAINCQQSNQERLVNVSE
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Template Sequence  LRMHYVDEG. PRDAEHTFLCLHGEPSWSFL. . . . . YRKMLPVFTAAGGRVVAPDLFGFGRSDKP. . . . . . . . . . . . . . . .
Template Known Secondary structure 

S.
TT
S


TT

GGG.....GTTTTT


TTSTTS
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   33......40. ........50.........60. ........70.........80.........90
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  KQLILQKINACIHNTGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQIAALYAERFPSSIRSIVFDGVVDIDD
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Template Sequence  . . . . . . . . . . . . . . . . . TDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVG
Template Known Secondary structure  .................S
GGG

T

S
TT
TTSS



SS
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   91........100.........110.........120.........130.........140.........150...
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  LNDNFSWKLRQAHSYQETFDRFAAWCARTKSCPLSSDRNQAIHQFHQLLLKLHNSPLTDSRGESISSDDLISLTTELLLW
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Template Conservation      .................................................................           
Template Sequence  LSPG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KGFESWRDFVA
Template Known Secondary structure  S
S
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   154... ..160........
 
   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  RSSWPTLATAVRQFSQGIVSNEIETALNSSIASEKVSDALGVILCVDQSDEQLSQEQRKSRKKALADAFPAVNFEREQSD
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Template Sequence  NSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFW. . . . . . . . . . . . . . .
Template Known Secondary structure  T
TT

STT

TT
SSGGG
GGGGS

STTSTT...............
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   169170.........180.........190.........200.........210.........220.........230...
 
   398.400.........410.........420.........430.........440........ .450 .........460.........470.....
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Query Sequence  LPEFCELWPIHRDLQQTRLKNTVLPSGLLFVAHKYDPTTPWINARKMADKF. SA. PLLTINGDGHTLALAGTNLCVDEAV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . STQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQEHGEPI. ARAAL
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S
TT
SSSSSTT



TT

SSGGGG
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   234.....240.........250.........260.........270.........280....... ..290..
 
   476...
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Query Sequence  VRHL
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Template Conservation    
 
Template Sequence  AAFG
Template Known Secondary structure  TT
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   293...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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