Job Description P34211 Confidence 99.57% Date Thu Jan 5 11:53:05 GMT 2012 Rank 35 Aligned Residues 254 % Identity 16% Template c2wj4B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:1h-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; PDBTitle: crystal structure of the cofactor-devoid 1-h-3-hydroxy-4-2 oxoquinaldine 2,4-dioxygenase (hod) from arthrobacter3 nitroguajacolicus ru61a anaerobically complexed with its4 natural substrate 1-h-3-hydroxy-4-oxoquinaldine Resolution 2.10 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	L	A	M	T	K	L	P	A	K	S	K	R	K	G	S	V	I	I	I	S	G	G	P	G	L	P	G	I	N	P	Y	I	N	F	D	W	P	V	T	N	L	R	E	S	W	D	I	I	G	F	D	P	R	G	V	G	Q	S	F	P	A	I	N	C	Q	Q	S	N	Q	E	R	L	V	N	V	S	E	K
Query Conservation
Alig confidence																	.															.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.															.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	L	S	Y	I	D	N	Q	R	D	T	D	G	P	.	A	I	L	L	L	P	G	W	C	H	D	H	R	V	.	.	.	.	.	Y	K	Y	L	I	Q	E	L	D	A	D	F	R	V	I	V	P	N	W	R	G	H	G	L	S	P	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															S		.								T	T			G	G	G	.	.	.	.	.	G								T	T	T	S								T	T		S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.															.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		Q	L	I	L	Q	K	I	N	A	C	I	H	N	T	G	A	E	V	I	R	H	I	G	S	H	E	A	V	Y	D	I	E	R	I	R	Q	A	L	G	D	K	Q	L	T	A	V	A	Y	S	Y	G	T	Q	I	A	A	L	Y	A	.	E	R	F	P	S	S	I	R	S	I	V	F	D	G	V	V	D	I	D	D
Query Conservation																																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	D	F	G	Y	Q	E	Q	V	K	D	A	L	E	I	L	D	Q	L	G	V	E	T	F	L	P	V	S	H	S	H	G	G	W	V	L	V	E	L	L	E	Q	A	G	P	E	R	A	P	R	G	I	I	M	D	W	L	M	W	A	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T			S							G	G	G																							S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	N	F	S	W	K	L	R	Q	A	H	S	Y	Q	E	T	F	D	R	F	A	A	W	C	A	R	T	K	S	C	P	L	S	S	D	R	N	Q	A	I	H	Q	F	H	Q	L	L	L	K	L	H	N	S	P	L	T	D	S	R	G	E	S	I	S	S	D	D	L	I	S	L	T	T	E	L	L	L	W
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	F	A	K	S	L	T	L	L	K	D	P
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133																																																																			.	.	.	.	.	.	140	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	S	W	P	T	L	A	T	A	V	R	Q	F	S	Q	G	I	V	S	N	E	I	E	T	A	L	N	S	S	I	A	S	E	K	V	S	D	A	L	G	V	I	L	C	V	D	Q	S	D	E	Q	L	S	Q	E	Q	R	K	S	R	K	K	A	L	A	D	A	F	P	A	V	N	F	E	R	E	Q	S	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	W	R	E	G	T	H	G	L	F	D	V	W	L	D	G	H	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	V	R	H	H	L	L	E	E	M	A	D	Y	G	Y	D	C	W	G	R	S
Template Known Secondary structure		T	T														T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																																							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	P	E	F	C	E	L	W	P	I	H	R	D	L	Q	Q	T	R	L	K	N	T	V	L	P	S	G	L	L	F	V	A	H	K	Y	D	P	T	T	P	W	I	N	A	R	K	M	A	D	K	F	S	.	A	P	L	L	T	I	N	G	D	G	H	T	L	A	L	A	G	T	N	L	C	V	D	E	A	V	V
Query Conservation																																																						.
Alig confidence															.																																							.																					.
Template Conservation															.																																																												.
Template Sequence		G	R	V	I	E	D	A	Y	G	R	N	G	S	.	P	M	Q	M	M	A	N	L	T	K	T	R	P	I	R	H	I	F	S	Q	P	T	E	P	E	Y	E	K	I	N	S	D	F	A	E	Q	H	P	W	F	S	Y	A	K	L	G	G	P	T	H	F	P	A	I	D	V	P	D	R	.	A	A	V	H	I	R
Template Known Secondary structure														S	.							T		S	S											S		S															T	T									S	S	S						S				.
Template Predicted Secondary structure															.																																																												.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.
		477	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		267	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions