Job Description P34211 Confidence 99.12% Date Thu Jan 5 11:53:05 GMT 2012 Rank 103 Aligned Residues 284 % Identity 7% Template c2hdwB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hypothetical protein pa2218; PDBTitle: crystal structure of hypothetical protein pa2218 from pseudomonas2 aeruginosa Resolution 2.00 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Y	T	D	T	G	K	D	V	S	D	E	N	I	P	L	V	R	L	A	M	T	K	L	P	A	K	S	K	R	K	G	S	.	V	I	I	I	S	G	G	P	G	L	P	G	I	N	P	Y	I	N	F	D	W	P	V	T	N	L	R	E	S	W	D	I	I	G	F	D	P	R	G	V	G	Q	S	F	P	A	I
Query Conservation																																		.
Alig confidence										.	.	.	.	.	.	.																		.																							.	.	.																					.	.
Template Conservation										.	.	.	.	.	.	.																																									.	.	.																					.	.
Template Sequence		F	A	N	R	Y	G	I	T	.	.	.	.	.	.	.	L	A	A	D	L	Y	L	P	K	N	R	G	G	D	R	L	P	A	I	V	I	G	G	P	F	G	A	V	K	E	Q	S	S	G	L	Y	A	Q	T	M	.	.	.	A	E	R	G	F	V	T	L	A	F	D	P	S	Y	T	G	E	S	G	G	.	.
Template Known Secondary structure					T	T	S			.	.	.	.	.	.	.									T	T			S	S											T	T			T	T	T										.	.	.			T	T									T	T	S	T	T	S			.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.																																									.	.	.																					.	.
Template SS confidence
		73	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.							.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		N	C	Q	Q	S	N	Q	E	R	L	V	N	V	S	E	K	Q	L	I	L	Q	K	I	N	A	C	I	H	N	T	G	A	E	V	I	R	H	I	G	S	H	E	A	V	Y	D	I	E	R	I	R	Q	A	L	G	D	.	.	.	.	.	.	K	Q	L	T	A	V	A	Y	S	Y	G	T	Q	I	A	A	L	Y
Query Conservation																																																										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	R	N	V	A	S	P	D	I	N	T	E	D	F	S	A	A	V	D	F	I	S	L	L	P	E	V	N	R	E	R	I	G	V	I	G	I	C	G	W	G	G	M	A	L	N	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S																			T	T	S	T	T												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	F	P	S	S	I	R	S	I	V	F	D	G	V	V	D	I	D	D	L	N	D	N	F	S	W	K	L	R	Q	A	H	S	Y	Q	E	T	F	D	R	F	A	A	W	C	A	R	T	K	S	C	P	L	S	S	D	R	N	Q	A	I	H	Q	F	H	Q	L	L	L	K	L	H	N	S	P	L	T	D
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	V	D	K	R	V	K	A	V	V	T	S	T	M	Y	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T								S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	G	E	S	I	S	S	D	D	L	I	S	L	T	T	E	L	L	L	W	R	S	S	W	P	T	L	A	T	A	V	R	Q	F	S	Q	G	I	V	S	N	E	I	E	T	A	L	N	S	S	I	A	S	E	K	V	S	D	A	L	G	V	I	L	C	V	D	Q	S	D	E	Q	L	S	Q	E	Q	R	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	R	V	M	S	K	G	Y	N	D	S	V	T	L	E	Q	R	T	R	T	L	E	Q	L	G	Q	Q	R	W	K	D	A	E	S	G	T	P	A	Y	Q	P	P	Y	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	G	E	A	Q	F	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							T	G	G	G																									S	S			B		S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.																.	.	.	.	.	.	.	.	260
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	K	K	A	L	A	D	A	F	P	A	V	N	F	E	R	E	Q	S	D	L	P	E	F	C	E	L	W	P	I	H	R	D	L	Q	Q	T	R	L	K	N	T	V	L	P	S	G	L	L	F	V	A	H	K	Y	D	P	T	T	P	W	I	N	A	R	K	M	A	D	K	F	S	A	P	L	L	T	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	Y	H	D	Y	Y	M	T	P	R	G	Y	H	P	R	A	V	N	S	G	N	A	W	T	M	T	T	P	L	S	F	M	N	M	P	I	L	T	Y	I	K	E	I	S	P	R	P	I	L	L	I	H	G	E	R	A	H	S	R	Y	F	S	E	T	A	Y	A	A	A	A	E	P	K	E	L	L	I	V	P
Template Known Secondary structure									T	S	T	T	T			T	T		T	T	T	T				B	T	T	T					T	T	S		S		T	T	G	G	G	S	T	T	S								T	T		T	T											S		S	S							T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	G	H	T	L	A	L	A	G	T	N	L	C	V	D	E	A	V	V	R	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	S	H	V	D	L	Y	D	R	L	D	R	I	P	F	D	R	I	A	G	F	F
Template Known Secondary structure		T			S	T						T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions