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Job DescriptionP34211
Confidence97.59%DateThu Jan 5 11:53:05 GMT 2012
Rank189Aligned Residues188
% Identity17%Templatec2fx5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:lipase; PDBTitle: pseudomonas mendocina lipase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980..... ....90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  VRLAMTK. LPAKSKRKGSVIIISGGPGLPGINPYINFDWPVTNLRESWDIIGFDPRGVGQSFPAINCQQSNQERLVNVSE
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Template Sequence  CRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGL. . . . LSHWASHGFVVAAAETSNAGTG. . . . . . . . . . . . . . . . . RE
Template Known Secondary structure  SSTTGGG



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   34.....40.........50.........60........ .70.........80.........90 ..
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  KQLILQKINACIHNTGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQIAALYAERFPSSIRSIVFDGVVDIDD
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Template Sequence  MLACLDYLVRENDTPYGTYSGKL. . . . . . . . . . . . . . . . NTGRVGTSGHSQGGGGSIMAG. . QDTRVRTTAPIQ. . . . . .
Template Known Secondary structure  SSSSTTTTT................T..TSTT

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   93......100.........110..... ....120.........130...... ...140........
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  LNDNFSWKLRQAHSYQETFDRFAAWCARTKSCPLSSDRNQAIHQFHQLLLKLHNSPLTDSRGESISSDDLISLTTELLLW
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   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  RSSWPTLATAVRQFSQGIVSNEIETALNSSIASEKVSDALGVILCVDQSDEQLSQEQRKSRKKALADAFPAVNFEREQSD
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   398.400.........410.........420.........430...... ...440........ .450.........460.........470....
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Query Sequence  LPEFCELWPIHRDLQQTRLKNTVLPSGLLFVAHKYDPTT. PWINARKMADKF. . SAPLLTINGDGHTLALAGTNLCVDEA
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Template Sequence  . . . . . . . . PYTLGLGHDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHF. EPVGSGGAYRGP
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SSTT

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   149150.........160.........170.........180.........190.........200....... ..210.........
 
   475....480
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Query Sequence  VVRHLL
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Template Sequence  STAWFR
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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