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Job DescriptionP34211
Confidence99.46%DateThu Jan 5 11:53:05 GMT 2012
Rank62Aligned Residues268
% Identity19%Templatec1zoiC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:esterase; PDBTitle: crystal structure of a stereoselective esterase from2 pseudomonas putida ifo12996
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80...... ...90.........100.........110.........120.... .....130.........140..
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Query Sequence  TDTGKDVSDENIPLVRLAMTKL. PAKSKRKGSVIIISGGPGLPGINPYINFDWPVTNLRES. WDIIGFDPRGVGQSFPAI
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Template Sequence  TTKDG. . . . . . . . . VQIFYKDWGPRDAP. . . VIHFHHGWPLSADD. . . . . WDAQLLFFLAHGYRVVAHDRRGHGRSSQV.
Template Known Secondary structure 
TTS.........
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TTS
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TT

GGG.....GTTT


TTSTTS


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   5.... 10.........20... ......30....... ..40.........50.........60......
 
   143......150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  NCQQSNQERLVNVSEKQLILQKINACIHNTGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQIAALYAERFPS
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Template Conservation  ..................................                                
       
     
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WDGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPE
Template Known Secondary structure  ..................................SS

ST
TT
T
TT
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   67..70.........80.........90.........100.........110..
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  SIRSIVFDGVVDIDDLNDNFSWKLRQAHSYQETFDRFAAWCARTKSCPLSSDRNQAIHQFHQLLLKLHNSPLTDSRGESI
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Template Sequence  DKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQA. . . . . . . . . . . . . . . . . . QVASNRAQFYRDVPAGPFYGYNRPGV
Template Known Secondary structure  S



S


S

B

SS
TTSB
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TTTTTTTSTT
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   113......120.........130.........140........ .150.........160.........170....
 
   303......310.........320.........330.........340.........350.........360.........370.........380..
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Query Sequence  SSDDLISLTTELLLWRSSWPTLATAVRQFSQGIVSNEIETALNSSIASEKVSDALGVILCVDQSDEQLSQEQRKSRKKAL
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Template Sequence  EASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 


TS
S


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   175....180.........190.........200.........210...
 
   383......390.........400.........410.........420.........430.........440........ . 450.........460
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Query Sequence  ADAFPAVNFEREQSDLPEFCELWPIHRDLQQTRLKNTVLPSGLLFVAHKYDPTTPWINARKMADKF. S. APLLTINGDGH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPH
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S
TT
SSS
TTTTSTTTT

T
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   214.....220.........230.........240.........250......
 
   461........470.........480.
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Query Sequence  TLALAGTNLCVDEAVVRHLLF
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Template Conservation      
 
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Template Sequence  GMPTTHADV. INADLLAFIRS
Template Known Secondary structure  TT.T
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   257..260..... ....270......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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