Job Description P34211 Confidence 97.67% Date Thu Jan 5 11:53:05 GMT 2012 Rank 186 Aligned Residues 192 % Identity 18% Template c1gxsC_ PDB info PDB header:lyase Chain: C: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain a; PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme Resolution 2.3 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.																					.	.										.	.	.	.	.
Query SS confidence																																											.	.	.																					.	.										.	.	.	.	.
Query Sequence		S	S	S	P	E	L	L	C	G	Y	L	S	V	P	L	K	Y	T	D	T	G	K	D	V	S	D	E	N	I	P	L	V	R	L	A	M	T	K	L	P	A	.	.	.	K	S	K	R	K	G	S	V	I	I	I	S	G	G	P	G	L	P	G	I	.	.	N	P	Y	I	N	F	D	W	P	.	.	.	.	.
Query Conservation																																											.	.	.																					.	.										.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																					.	.										.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	A	F	G	M	Y	G	G	Y	V	T	I	D	D	N	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	Y	Y	W	F	Q	E	A	D	T	A	D	P	A	A	A	P	L	V	L	W	L	N	G	G	P	G	C	S	S	I	G	L	G	A	M	Q	E	L	G	A	F	R	V	H	T	N
Template Known Secondary structure		T			S											T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S		G	G	G	S									T	T	T			T	T	T	T					T	S	S	S					T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
									118	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.															.
Query SS confidence		.	.	.	.	.	.	.															.
Query Sequence		.	.	.	.	.	.	.	V	T	N	L	R	E	S	W	D	I	I	G	F	D	.	P	R	G	V	G	Q	S	F	P	A	I	N	C	Q	Q	S	N	Q	E	R	L	V	N	V	S	E	K	Q	L	I	L	Q	K	I	N	A	C	I	H	N	T	G	A	E	V	I	R	H	I	G	S	H	E	A	V	Y	D	I
Query Conservation		.	.	.	.	.	.	.															.
Alig confidence		.	.	.	.	.	.	.															.									.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	S	L	L	L	N	E	Y	A	W	N	K	A	A	N	I	L	F	A	E	S	P	A	G	V	G	F	S	Y	.	S	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	D	L	S	M	G	D	D	K	M	A	Q	D	T
Template Known Secondary structure		S	S						T	T		G	G	G	T	S								S	T	T	S	T	T			.		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G
Template Predicted Secondary structure																																.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.																																.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.									.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.														.
Query SS confidence								.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.														.
Query Sequence		E	R	I	R	Q	A	.	.	.	.	.	.	.	L	G	D	K	Q	L	T	A	V	A	Y	S	Y	G	T	Q	I	A	A	L	Y	A	E	R	F	P	S	S	.	.	.	.	.	.	.	.	I	R	S	I	V	F	D	G	V	V	D	I	D	.	D	L	N	D	N	F	S	W	K	L	R	Q	A	H	S	Y	Q
Query Conservation								.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.														.
Alig confidence								.	.	.	.	.	.	.													.																.	.	.	.	.	.	.	.														.
Template Conservation																											.
Template Sequence		Y	T	F	L	V	K	W	F	E	R	F	P	H	Y	N	Y	R	E	F	Y	I	A	G	E	S	.	G	H	F	I	P	Q	L	S	Q	V	V	Y	R	N	R	N	N	S	P	F	I	N	F	Q	G	L	L	V	S	S	G	L	T	N	D	H	E	D	M	I	G	M	F	E	S	W	W	H	H	G	L	I	S	D
Template Known Secondary structure												S	G	G	G	T	T								S		.	T	T												T	T	T	T	S	T	T	S									S																			T	T		S
Template Predicted Secondary structure																											.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	F	D	R	F	A	A	W	C	A	R	T	K	S	C	P	L	S	S	D	R	N	Q	A	I	H	Q	F	H	Q	L	L	L	K
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		E	T	R	D	S	G	L	K	V	C	.	.	.	P	G	T	S	F	M	H	P	T	P	E	C	T	E	V	W	N	K	A	L	A	E
Template Known Secondary structure											S	.	.	.	T	T	S		S	S	S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions