Return to main results Retrieve Phyre Job Id

Job DescriptionP34211
Confidence88.80%DateThu Jan 5 11:53:05 GMT 2012
Rank237Aligned Residues63
% Identity16%Templatec1gxsB_
PDB info PDB header:lyaseChain: B: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain b; PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   423......430.........440......... 450 .........460.........470....
Predicted Secondary structure 












..........................
..









Query SS confidence 


























. . . . . . . . . . . . . . . . . . . . . . . . . .
. .























Query Sequence  SGLLFVAHKYDPTTPWINARKMADKFS. . . . . . . . . . . . . . . . . . . . . . . . . . A. . PLLTINGDGHTLALAGTNLCVDEA
Query Conservation   




 
  

 

   
   
  
 .......................... .. 

 
 
 


      
 
    
Alig confidence 


























..........................
..


















.



Template Conservation 





 

 
   
  
    
  
 
     
             
  
   



  
  





 


  .   
Template Sequence  LRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQ. AFLL
Template Known Secondary structure 


TT
SSS
TT


SSTT

STTTT

SS
.
Template Predicted Secondary structure 

































.
Template SS confidence 















































































   349350.........360.........370.........380.........390.........400.........410.........420... ....
 
   475....480......
Predicted Secondary structure 





Query SS confidence 











Query Sequence  VVRHLLFPGKSE
Query Conservation 
  

  
  
 
Alig confidence 











Template Conservation     

 
  

 
Template Sequence  FKQFLKGEPMPA
Template Known Secondary structure  T




Template Predicted Secondary structure 






Template SS confidence 











   428.430.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions