Job Description P76103 Confidence 1.73% Date Thu Jan 5 12:18:58 GMT 2012 Rank 86 Aligned Residues 243 % Identity 9% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	M	R	I	I	P	H	S	L	A	A	A	M	L	A	G	I	L	L	R	F	G	L	Q	A	F	A	S	L	D	G	Q	F	T	L	C	G	S	M	L	L	V	W	L	A	T	K	A	V	A	P	R	Y	A	V	I	A	A	M	I	I	G	I	V	I	V	I	A	Q	G	D	V	V	T	T	D	V	V	F
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		Y	L	L	R	L	V	C	F	L	T	L	L	G	V	T	A	A	L	F	I	F	A	V	D	L	A	V	H	G	L	E	E	L	R	M	K	I	S	R	L	A	G	R	F	A	G	Y	I	L	Y	V	.	V	S	G	V	A	L	C	L	L	S	T	F	W	C	A	V	L	S	T	E	A	E	G	S	G	L	P	Q
Template Known Secondary structure																																										S											.																	S		G	G	G		B		S
Template Predicted Secondary structure																																																					.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		195									.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220									.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		K	.	.	.	.	.	.	.	.	P	V	L	P	T	Y	I	T	P	D	F	S	F	A	H	S	L	S	V	A	L	P	L	F	L	.	.	.	.	.	.	.	.	V	T	M	A	S	Q	N	A	P	G	I	A	A	M	K	A	.	.	.	.	.	A	G	Y	S	A	P	V	S	P	L	I	V	F	T	G	L	L
Query Conservation			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		M	K	S	I	L	S	G	F	Y	D	K	M	R	S	A	L	E	L	R	V	L	F	A	K	A	L	G	L	I	C	A	I	G	G	G	L	P	V	G	W	E	G	P	N	V	H	I	A	C	I	I	A	H	Q	F	Y	R	L	G	V	F	K	E	L	C	T	D	R	A	L	R	L	Q	T	L	A	A	A	C	A
Template Known Secondary structure							T	T	T					G	G	G	G	S																	T	T		S		B	S																T	T	S	T	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	F	S	P	F	G	V	Y	S	V	G	I	A	A	I	T	A	A	I	C	Q	S	P	E	A	H	P	D	K	D	Q	R	W	L	A	A	A	V	A	G	I	F	Y	L	L	A	G	L	F	G	S	A	I	T	G	M	M	A	A	L	P	V	S	W	I	Q	M	L	A	G	L	A	L	L	S	T	I	G
Query Conservation
Alig confidence														.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		V	G	L	A	S	S	F	G	A	P	L	G	.	.	.	.	.	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	E	L	D	V	S	R	T	Q	T	L	L	Y	A	I	L	G	A	L	M	G	V	L	G	A	L	F	I	R	C	V	R
Template Known Secondary structure									T					.	.	.	.	.									T		S	S			T	T																T	T						S		T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	L	Y	Q	A	L	H	N	E	R	E	R	D	A	A	V	V	A	F	L	V	T	A	S	G	L	T	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L	Q
Template Known Secondary structure									S	S	S	T	T			T															T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions