Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8L7
Confidence1.77%DateThu Jan 5 11:08:08 GMT 2012
Rank84Aligned Residues24
% Identity21%Templatec3bqqB_
PDB info PDB header:lipid binding proteinChain: B: PDB Molecule:proactivator polypeptide; PDBTitle: crystal structure of human saposin d (triclinic)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.....
Predicted Secondary structure 


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Query Sequence  DETLEQAYDIFLELAADNLDPADV
Query Conservation 




 


 


 




  


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Template Conservation     
  
   

  
     
  
Template Sequence  DQFVAEYEPVLIEILVEVMDPSFV
Template Known Secondary structure  TT


Template Predicted Secondary structure 


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   48.50.........60.........70.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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