Job Description P33012 Confidence 100.00% Date Thu Jan 5 11:50:47 GMT 2012 Rank 2 Aligned Residues 149 % Identity 13% Template c3lurB_ PDB info PDB header:transcription activator Chain: B: PDB Molecule:putative bacterial transcription regulation protein; PDBTitle: crystal structure of putative bacterial transcription regulation2 protein (np_372959.1) from staphylococcus aureus mu50 at 1.81 a3 resolution Resolution 1.81 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																								.	.	.	.																						.	.
Query SS confidence																								.	.	.	.																						.	.
Query Sequence		M	N	Y	E	I	K	Q	E	E	K	R	T	V	A	G	F	H	L	V	G	P	W	.	.	.	.	E	Q	T	V	K	K	G	F	E	Q	L	M	M	W	V	D	S	K	N	I	V	.	.	P	K	E	W	V	A	V	Y	Y	D	N	P	D	E	T	P	A	E	K	L	R	C	D	T	V	V	T	V	P	G	Y
Query Conservation																								.	.	.	.																						.	.
Alig confidence																								.	.	.	.																						.	.
Template Conservation
Template Sequence		X	E	Y	Q	L	Q	Q	L	A	S	L	T	L	V	G	I	K	E	T	Y	E	N	G	R	Q	A	Q	Q	H	I	A	G	F	W	Q	R	C	Y	Q	E	G	V	I	A	D	L	Q	L	K	N	N	G	D	L	A	G	I	L	G	L	C	I	P	E	L	D	G	K	X	S	Y	X	I	A	V	T	G	D	N	S
Template Known Secondary structure																						S	S																		T	T											S	S	S	S	S									S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		F	T	L	P	E	N	S	E	G	V	I	L	T	E	I	T	G	G	Q	Y	A	V	A	V	A	R	V	V	G	D	D	.	F	A	K	P	W	Y	Q	F	F	N	S	L	L	Q	D	S	A	Y	E	M	L	P	K	P	C	F	E	V	Y	L	N	N	G	A	E	D	G	Y	W	D	I	E	M	Y	V	A	V	Q
Query Conservation																																	.
Alig confidence		.	.	.	.																												.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	D	I	A	K	Y	D	V	I	T	L	A	S	S	K	Y	X	V	F	E	A	Q	G	A	V	P	K	A	V	Q	Q	K	X	E	E	V	H	H	Y	I	H	Q	Y	Q	A	N	T	V	K	S	A	P	F	F	E	L	Y	Q	D	G	D	T	T	S	E	K	Y	I	T	E	I	W	X	P	V	K
Template Known Secondary structure		.	.	.	.	S		T	T	T	S																	S	S	T	T																			T	T	T	B		S	S								S	S		T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions