Job Description P33012 Confidence 99.68% Date Thu Jan 5 11:50:47 GMT 2012 Rank 9 Aligned Residues 150 % Identity 11% Template c3d6zA_ PDB info PDB header:transcription regulator/dna Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator; PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																								.																																																						.
Query SS confidence																								.																																																						.
Query Sequence		N	Y	E	I	K	Q	E	E	K	R	T	V	A	G	F	H	L	V	G	P	W	E	.	Q	T	V	K	K	G	F	E	Q	L	M	M	W	V	D	S	K	N	I	V	P	K	E	W	V	A	V	Y	Y	D	N	P	D	E	T	P	A	E	K	L	R	C	D	T	V	V	T	V	P	G	Y	F	T	.	L	P	E
Query Conservation																								.																																																						.
Alig confidence																								.																																																						.
Template Conservation
Template Sequence		E	V	F	V	L	D	E	E	E	I	R	I	I	Q	T	E	A	E	G	I	G	P	E	N	V	L	N	A	S	Y	S	K	L	K	K	F	I	E	S	A	D	G	F	T	N	N	S	Y	G	A	T	F	S	F	Q	P	Y	T	S	I	D	E	M	T	Y	R	H	I	F	T	P	V	L	T	N	K	Q	I	S	S
Template Known Secondary structure																			T	T			T	T	T			G	G	G	G												S	S			S												S		G	G	G				S										S			S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		N	S	E	G	V	I	L	T	E	I	T	G	G	Q	Y	A	V	A	V	A	R	V	V	G	D	D	F	A	K	P	W	Y	Q	F	F	N	S	L	L	Q	D	S	A	Y	E	M	L	P	K	P	C	F	E	V	Y	L	N	N	G	.	.	.	A	E	D	G	Y	W	D	I	E	M	Y	V	A	V	Q
Query Conservation																																																													.	.	.
Alig confidence																																					.												.												.	.	.
Template Conservation																																					.												.
Template Sequence		I	T	P	D	M	E	I	T	T	I	P	K	G	R	Y	A	C	I	A	Y	N	F	S	P	E	H	Y	F	L	N	L	Q	K	L	I	.	K	Y	I	A	D	R	Q	L	T	V	V	.	S	D	V	Y	E	L	I	I	P	I	H	Y	S	P	K	K	Q	E	E	Y	R	V	E	M	K	I	E	I	L
Template Known Secondary structure				T	T	S							S																								.						T	T			B		.	S									S				S	S	S
Template Predicted Secondary structure																																					.												.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions