Job Description P33012 Confidence 2.15% Date Thu Jan 5 11:50:47 GMT 2012 Rank 42 Aligned Residues 59 % Identity 14% Template c2yibC_ PDB info PDB header:transferase Chain: C: PDB Molecule:rna-directed rna polymerase; PDBTitle: structure of the rna polymerase vp1 from infectious pancreatic2 necrosis virus Resolution 3.80 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.
Query Sequence		A	V	A	R	V	V	G	D	D	F	A	K	P	W	Y	Q	F	F	N	S	L	L	Q	D	S	A	Y	.	.	.	.	.	.	.	.	E	M	L	P	K	P	C	F	E	V	Y	L	N	N	G	A	E	D	G	Y	W	D	I	E	M	Y	V	A	V	Q	P	K	H
Query Conservation																													.	.	.	.	.	.	.	.
Alig confidence																			.										.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		F	K	I	E	R	E	L	K	N	L	R	E	T	I	V	E	A	.	V	E	T	A	P	Q	D	G	Y	L	A	D	G	S	D	L	P	P	I	R	P	G	K	A	V	E	L	D	L	L	G	W	S	A	I	Y	S	R	Q	M	E	M	F	V	P	V	L	E	N	E
Template Known Secondary structure										S									.			T			S	S	S	T	T	T	T			S	S			S	S										T	T							T	T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions