 |
| Job Description | P33012 | | Confidence | 1.28% | Date | Thu Jan 5 11:50:47 GMT 2012 |
| Rank | 97 | Aligned Residues | 25 |
| % Identity | 12% | Template | c2k6xA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:rna polymerase sigma factor rpod; |
PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
|
| Resolution | UNK |
|
| | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
| Predicted Secondary structure | |
 |
|
|
|  | | | | | | | | | | | | | | | |
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | P | W | E | Q | T | V | K | K | G | F | E | Q | L | M | M | W | V | D | S | K | N | I | V | P |
| Query Conservation | |
| | | |
| |
| | | |
| | |
| | | | | | | | |
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | | | | | |
|
| |
|
| | |
|
|
|
|
|
|
|
|
| Template Sequence | |
G | S | H | M | P | Q | I | E | R | R | I | K | K | L | I | S | L | G | K | K | K | G | Y | I | T |
| Template Known Secondary structure | |
|
|
|
| | | | | | | | | | | | | | | | | | S | S |
| B |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | | | | | | | | | | |
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
