Job Description P77269 Confidence 96.50% Date Thu Jan 5 12:27:02 GMT 2012 Rank 96 Aligned Residues 218 % Identity 12% Template c3sm9A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:metabotropic glutamate receptor 3; PDBTitle: crystal structure of metabotropic glutamate receptor 3 precursor in2 presence of ly341495 antagonist Resolution 2.26 Å

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		30	.	.	.	.	.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		E	M	T	I	G	A	I	Y	L	D	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	.	.	.	.	.	.	.	.	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	V	L	G	G	L	F	P	I	N	E	K	G	T	T	E	E	C	G	R	I	N	E	D	R	G	I	Q	R	L	E	A	M	L	F	A	I	D	E	I	N	K	D	D	Y	L	L	P	G	V	K	L	G	V	H	I	L	D	T	C	S	R	D	T	Y	A	L	E	Q	S	L	E	F	V	R	A	S	L	L
Template Known Secondary structure		S																	S						T	T	T	T																		S	S	S	S	T	T											T	T															T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		A	I	.	I	L	S	A	V	S	E	N	G	S	S	R	T	V	R	R	A	S	E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y	V	S	A	Y	L	V	G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	N
Query Conservation				.
Alig confidence				.																																						.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		I	A	G	V	I	G	G	S	Y	S	S	V	S	I	Q	V	A	N	L	L	R	L	F	Q	I	P	Q	I	S	Y	A	S	T	S	A	K	L	S	D	K	.	.	.	.	S	R	Y	D	Y	F	A	R	T	V	P	P	D	F	Y	Q	A	K	A	M	A	E	I	L	R	F	F	N	W	T	Y	V	S	T	V	A
Template Known Secondary structure									S	S												G	G	G	T						S	S				G	G	G	G		T	.	.	.	.	T	T	T	T	T				S	S			T														T	T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	A	F	E	V	C	V	Q	R	R	K	G	F	E	E	V	L	K	S	R	V	P	G	A	Q	I	V	A	N	Q	E	G	T	V	L	D	K	A	I	S	V	G	E	K	L	I	I	S	T	P	D	L	N	A	I	M	G	E	S	G	G	A	T	L	G	A	V	K	A	V	R	N	Q	N	Q	A	G	K	I
Query Conservation
Alig confidence		.																																				.																																								.	.
Template Conservation		.																																				.																																								.	.
Template Sequence		.	S	E	G	D	Y	G	E	T	G	I	E	A	F	E	Q	E	A	R	L	R	N	I	S	I	A	T	A	E	K	V	G	R	I	R	K	.	S	Y	D	S	V	I	R	E	L	L	Q	K	P	N	A	R	V	V	V	L	F	M	R	S	D	D	S	R	E	L	I	A	A	A	S	R	A	N	A	.	.	S	F
Template Known Secondary structure		.		S	S																T	T	T															.											T		T	T																							T	T		.	.
Template Predicted Secondary structure		.																																				.																																								.	.
Template SS confidence
			193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.
		249	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	F	G	S	D	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	W	V	A	S	D	G
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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