Job Description P77269 Confidence 36.04% Date Thu Jan 5 12:27:02 GMT 2012 Rank 192 Aligned Residues 250 % Identity 17% Template c3opyH_ PDB info PDB header:transferase Chain: H: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state Resolution 3.05 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																				.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	A	R	A	A	E	K	E	M	T	I	G	A	I	Y	L	D	.	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	A	V	N	E	R	V	R	K	T	I	G	V	M	T	S	G	G	D	S	P	G	M	N	P	F	V	R	A	V	V	R	A	G	I	Y	K	G	C	K	V	F	C	I	H	E	G	Y	E	G	L	V	R	G	G	E	K	Y	I	K	E	T	Q	W	H	D	V	R	G	W	L	V	E	G	G	T	N	I	G
Template Known Secondary structure		S																	S	S			T	T															T	T							T	T									S	T	T	T						G	G	G	G	T	T	T	T	T			S		S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
										72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.														.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S	S	R	T	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	S	E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y
Query Conservation		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		T	A	R	C	K	E	F	R	E	R	S	G	R	L	K	A	C	K	N	M	I	D	M	G	I	D	A	L	I	V	C	G	G	D	G	S	L	T	G	A	D	R	F	R	S	E	W	P	S	L	I	E	E	Q	Q	Q	F	N	T	H	Q	N	L	N	I	C	G	A	.	.	.	.	.	V	G	S	I	D	N	D
Template Known Secondary structure						S	G	G	G	S														T	T																						T														T		S							.	.	.	.	.				S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		V	S	A	Y	L	V	G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	N	C	E	A	F	E	V	C	V	Q	R	R	K	G	F	E	E	V	L	K	S	R	V	P	G	A	Q	I	V	A	N	Q	E	G	T	V	L	.	.	.	.	.	D
Query Conservation																																																																												.	.	.	.	.
Alig confidence																														.									.	.	.	.	.	.																																.	.	.	.	.
Template Conservation																														.									.	.	.	.	.	.
Template Sequence		M	S	S	T	D	A	T	I	G	A	F	S	S	L	D	R	I	C	R	A	I	D	Y	I	D	A	T	A	.	S	H	S	R	A	F	I	V	.	.	.	.	.	.	E	V	M	G	R	H	C	G	W	L	G	L	L	A	G	L	A	T	S	A	D	Y	I	L	I	P	E	K	P	A	S	S	R	E	W	Q	D
Template Known Secondary structure			S	S		S	S																				S			.			S						.	.	.	.	.	.					S	S												T	T		S					T	T	S				S	S
Template Predicted Secondary structure																														.									.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230								.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.
Query Sequence		K	A	I	S	V	G	E	K	L	I	I	S	T	P	D	L	N	A	I	M	G	E	S	G	G	.	.	.	.	.	.	.	A	T	L	G	A	V	K	A	V	R	N	Q	N	Q	A	G	K	I	A	V	F	G	S	D	M	T	T	E	I	A	Q	E	L	E	N	N	Q	V	L	K	A	V	V	D	I	S	G	K
Query Conservation																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		Q	M	C	D	I	V	G	K	H	R	A	R	G	K	R	K	T	I	V	I	V	A	E	G	A	I	S	N	D	L	S	P	I	S	C	D	Q	V	K	D	V	L	V	N	R	L	G	L	D	T	R	V	T	T	L	G	H	V	.	.	.	.	.	.	.	Q	R	G	G	T	A	V	A	F	D	R	I	Y	A	T
Template Known Secondary structure														T										T	T		B		T	T			B													T	S										G	G	G	.	.	.	.	.	.	.	G	T		S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.								.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		279	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	G	N	A	V	F	A	Q	T	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	G	V	E	A	V	N	A	V	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions