Job Description P77269 Confidence 92.28% Date Thu Jan 5 12:27:02 GMT 2012 Rank 109 Aligned Residues 250 % Identity 12% Template c3opyE_ PDB info PDB header:transferase Chain: E: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state Resolution 3.05 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	K	E	M	T	I	G	A	I	Y	L	D	T	Q	.	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	G	K	K	K	I	A	I	I	T	S	G	G	D	A	P	G	M	N	A	A	V	R	A	V	T	R	A	G	I	F	Y	G	C	K	V	Y	A	C	Y	E	G	Y	T	G	L	V	K	G	G	D	M	L	K	E	L	Q	W	Q	D	V	R	G	L	L	S	I	G	G	T	I	I	G	T	A	R	C	K	E
Template Known Secondary structure					S									S	S			T	T															T	T								T							S		S	T	T						T	T	T	T	T	T	G	G	G			S		S	S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
				72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S	S	R	T	V	R	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y	V	S	A	Y	L	V
Query Conservation		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		F	R	E	R	W	G	R	L	Q	A	C	Y	N	M	V	S	N	G	I	D	A	L	V	V	C	G	G	D	G	S	L	T	G	A	D	L	F	R	K	E	W	P	E	L	I	K	E	K	E	Q	Y	E	T	H	R	N	L	T	I	V	G	L	.	.	.	.	.	V	G	S	I	D	N	D	M	C	G	T	D	S
Template Known Secondary structure		T	T	S														T	T																							T	T												T	T	S							.	.	.	.	.				S	S				T	T		S
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	N	C	E	A	F	E	V	C	V	Q	R	R	K	G	F	E	E	V	L	K	S	R	V	P	G	A	Q	I	V	A	N	Q	E	G	T	V	L	D	K	A	I	S	V	G	E	K	L	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	G	A	Y	S	S	L	E	R	I	I	E	L	V	D	Y	I	D	A	T	A	A	S	H	S	R	A	F	V	V	E	V	M	G	R	H	C	G	W	L	G	L	M	S	G	I	A	T	G	A	D	Y	I	F	I	P	E	R	P	P	S	E	S	N	W	K	D	D	L	K	K	V	C	L	R	H	R	E	K
Template Known Secondary structure																					S	S				T	T										S	S		T											T		S					T	T	S				T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		S	T	P	D	L	N	A	I	M	G	E	S	.	.	.	.	.	.	.	G	G	A	T	L	G	A	V	K	A	V	R	N	Q	N	Q	A	G	K	I	A	V	F	G	S	D	M	T	T	E	I	A	Q	E	L	E	N	N	Q	V	L	K	A	V	V	D	I	S	G	K	K	M	G	N	A	V	F	A	Q	T	L
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		G	R	R	K	T	T	V	I	V	A	E	G	A	I	D	D	Q	L	N	P	I	T	S	E	E	V	K	D	V	L	V	E	I	G	L	D	T	R	I	T	R	L	G	.	.	.	.	.	.	.	.	.	H	V	Q	R	G	G	A	P	C	A	F	D	R	F	L	A	T	V	Q	G	V	D	A	V	R	A	V	L
Template Known Secondary structure		T										T	T		B		T	T	S		B												T	T	T									G	.	.	.	.	.	.	.	.	.	G	G	G	G		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.										.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		290
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		521

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions