Phyre 2 alignment of P77269 with c3o8oC

Job Description P77269
Confidence 42.61% Date Thu Jan 5 12:27:02 GMT 2012

Rank 182 Aligned Residues 247

% Identity 13% Template c3o8oC_

PDB info PDB header:transferase Chain: C: PDB Molecule:6-phosphofructokinase subunit alpha; PDBTitle: structure of phosphofructokinase from saccharomyces cerevisiae

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																																					.
Predicted Secondary structure											.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	E	M	T	I	G	A	I	Y	L	D	.	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation											.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	K	K	K	I	A	V	M	T	S	G	G	D	S	P	G	M	N	A	A	V	R	A	V	V	R	T	G	I	H	F	G	C	D	V	F	A	V	Y	E	G	Y	E	G	L	L	R	G	G	K	Y	L	K	K	M	A	W	E	D	V	R	G	W	L	S	E	G	G	T	L	I	G	T	A	R	S	M	E	F	R	K
Template Known Secondary structure										S	S			T	T															T	T							T	T									T	T	S						G	G	G	G	T	T	G	G	G			S		T	T						S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
	205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

	73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S	S	R	T	V	R	R	A	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y	V
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence	R	E	G	R	R	Q	A	A	G	N	L	I	S	Q	G	I	D	A	L	V	V	C	G	G	D	G	S	L	T	G	A	D	L	F	R	H	E	W	P	S	L	V	D	E	L	V	A	E	G	R	F	T	K	E	E	V	A	P	Y	K	N	L	S	I	V	G	L	.	.	.	.	.	V	G	S	I	D	N	D	M
Template Known Secondary structure															T																					T	T										S	S	S	S			T	T	T	T	T	T	T		S							.	.	.	.	.		B		S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
	285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.	.

	132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	A	Y	L	V	G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	N	C	E	A	F	E	V	C	V	Q	R	R	K	G	F	E	E	V	L	K	S	R	V	P	G	A	Q	I	V	A	N	Q	E	G	T	V	L	D	K	A	I	S	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence	S	G	T	D	S	T	I	G	A	Y	S	A	L	E	R	I	C	E	M	V	D	Y	I	D	A	T	A	K	S	H	S	R	A	F	V	V	E	V	M	G	R	H	C	G	W	L	A	L	M	A	G	I	A	T	G	A	D	Y	I	F	I	P	E	R	A	V	P	H	G	K	W	Q	D	E	L	K	E	V	C	Q
Template Known Secondary structure	T	T	S	S			B	T																						T	T										T	T												T	T		S					G	G	G		B		T	T	T
Template Predicted Secondary structure
Template SS confidence
	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

	212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence	E	K	L	I	I	S	T	P	D	L	N	A	I	M	G	E	.	.	.	.	.	.	.	S	G	G	A	T	L	G	A	V	K	A	V	R	N	Q	N	Q	A	G	K	I	A	V	F	G	S	D	M	T	T	E	I	A	Q	E	L	E	N	N	Q	V	L	K	A	V	V	D	I	S	G	K	K	M	G	N	A	V
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.
Template Sequence	R	H	R	S	K	G	R	R	N	N	T	I	I	V	A	E	G	A	L	D	D	Q	L	N	P	V	T	A	N	D	V	K	D	A	L	I	E	L	G	L	D	T	K	V	T	I	L	G	H	.	.	.	.	.	.	.	.	.	V	Q	R	G	G	T	A	V	A	H	D	R	W	L	A	T	L	Q	G	V	D	A
Template Known Secondary structure					T	T										T	T		B	B	T	T	S		B														T									G	G	.	.	.	.	.	.	.	.	.	G	G	T		S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.										.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510

	285	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence	F	A	Q	T	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence	V	K	A	V	L	E
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
	511	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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