Job Description P77269 Confidence 93.24% Date Thu Jan 5 12:27:02 GMT 2012 Rank 103 Aligned Residues 211 % Identity 9% Template c3kg2A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:glutamate receptor 2; PDBTitle: ampa subtype ionotropic glutamate receptor in complex with competitive2 antagonist zk 200775 Resolution 3.60 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		E	M	T	I	G	A	I	Y	L	D	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	.	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S	S	R	T	V	R	R	A
Query Conservation																																				.
Alig confidence																																				.																												.
Template Conservation																																																																.
Template Sequence		S	I	Q	I	G	G	L	F	P	R	G	A	D	Q	E	Y	S	A	F	R	V	G	M	V	Q	F	S	T	S	E	F	R	L	T	P	H	I	D	N	L	E	V	A	N	S	F	A	V	T	N	A	F	C	S	Q	F	S	R	G	V	Y	A	.	I	F	G	F	Y	D	K	K	S	V	N	T	I	T	S	F	C
Template Known Secondary structure											T	T															T			S	S												T	T															T	T		S		.							T	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y	V	S	A	Y	L	V	G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	N	C	E	A	F	E	V	C	V	Q	R	R	K	G	F	E	E	V	L	K	S
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		G	T	L	H	V	S	F	I	T	P	S	F	P	T	D	G	T	H	P	F	V	I	Q	M	R	P	D	L	K	G	A	L	L	S	.	.	.	.	.	.	.	.	.	.	.	.	L	I	E	Y	Y	Q	W	D	K	F	A	Y	L	Y	.	.	D	S	D	R	G	L	S	T	L	Q	A	V	L	D	S	A	A	E
Template Known Secondary structure				T	T							S				S	S			S	S					S										.	.	.	.	.	.	.	.	.	.	.	.					T	T		S							.	.		G	G	G		T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.													.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		189	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		R	V	P	G	.	.	A	Q	I	V	A	N	Q	E	G	T	V	L	D	K	A	I	S	V	G	E	K	L	I	I	S	T	P	D	L	N	A	I	M	G	E	S	G	G	A	T	L	G	A	V	K	A	V	R	N	Q	N	Q	A	G	K	I	A	V	F	G	S	D	M
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		K	K	W	Q	V	T	A	I	N	V	G	N	I	N	N	D	K	K	D	E	T	Y	R	S	L	F	Q	D	L	E	L	K	K	E	R	R	V	I	L	D	C	E	R	D	K	V	N	D	I	V	D	Q	V	I	T	I	G	K	H	V	K	G	Y	H	Y	I	I	A	N
Template Known Secondary structure		T	T									S	S			S	S	S	T	T	T	T	T	T	T					T	T	T	T	T																								T	T	T	B	T	T							S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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