Job Description P77269 Confidence 100.00% Date Thu Jan 5 12:27:02 GMT 2012 Rank 56 Aligned Residues 258 % Identity 12% Template c3huuC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator like protein; PDBTitle: crystal structure of transcription regulator like protein from2 staphylococcus haemolyticus Resolution 1.95 Å

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		29	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		K	E	M	T	I	G	A	I	Y	L	D	.	.	.	.	.	.	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S	S
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																											.	.																																	.	.
Template Conservation																																													.	.																																	.	.
Template Sequence		K	T	L	T	I	G	L	I	Q	K	S	S	A	P	E	I	R	Q	N	P	F	N	S	D	V	L	N	G	I	N	Q	A	C	N	V	R	G	Y	S	T	R	M	T	.	.	V	S	E	N	S	G	D	L	Y	H	E	V	K	T	M	I	Q	S	K	S	V	D	G	F	I	L	L	Y	S	L	K	D	.	.	D
Template Known Secondary structure											S								T	S																	T	T							.	.			S	S														T	T			S					S	S		B	T	T	.	.
Template Predicted Secondary structure																																													.	.																																	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	R	R	A	S	E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y	V	S	A	Y	L	V	G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	N	C	E	A	F	E	V	C	V	Q	R	R	K	G	F
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	E	H	L	L	N	E	F	K	V	P	Y	L	I	V	G	K	S	L	N	Y	E	N	I	I	H	I	D	N	D	N	I	D	A	A	Y	Q	L	T	.	.	.	.	.	.	.	.	.	.	Q	Y	L	Y	H	L	G	H	R	H	I	L	F	L	Q	E	S	G	H	Y	A	V	T	E	D	R	S	V	G	F
Template Known Secondary structure										T	T							S				S		S	S																	.	.	.	.	.	.	.	.	.	.							T										S	S		B
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		E	E	V	L	K	S	R	V	P	G	A	Q	I	V	A	N	Q	E	G	T	V	L	D	K	A	I	S	V	G	E	K	L	I	I	S	T	P	D	L	N	A	I	M	G	E	S	G	G	A	T	L	G	A	V	K	A	V	R	N	Q	N	.	.	Q	A	G	K	I	A	V	F	G	S	D	M	T	T	E	I	A
Query Conservation																																																															.	.
Alig confidence																				.	.	.	.	.	.	.	.																																				.	.																	.
Template Conservation																				.	.	.	.	.	.	.	.																																																						.
Template Sequence		K	Q	Y	C	D	D	V	K	I	S	N	D	C	V	V	I	K	S	.	.	.	.	.	.	.	.	M	N	D	L	R	D	F	I	K	Q	Y	M	P	S	V	I	I	T	S	D	V	M	L	N	M	Q	L	L	N	V	L	Y	E	Y	Q	L	R	I	P	E	D	I	Q	T	A	T	F	N	T	S	F	L	T	.
Template Known Secondary structure								T	T										S	.	.	.	.	.	.	.	.									T	T				S					S	S														T	T			T	T	T	T							S		S				.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																																						.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	E	N	N	Q	V	L	K	A	V	V	D	I	S	G	K	K	M	G	N	A	V	F	A	Q	T	L	K	V	I	N	K	Q	A	D	G	E	K	V	I	Q	V	P	I	D	L	Y	T	K	T	E	D	G	K
Query Conservation
Alig confidence		.	.	.																																	.	.	.	.
Template Conservation		.	.	.																																	.	.	.	.
Template Sequence		.	.	.	E	N	A	T	P	S	Q	T	S	V	N	I	N	P	D	V	L	G	F	T	A	G	N	T	I	I	D	V	L	R	N	F	.	.	.	.	R	E	K	L	I	S	T	Q	I	V	E	R	V	S	T	T	K
Template Known Secondary structure		.	.	.		T	S	S	S																								T	T			.	.	.	.													T	T
Template Predicted Secondary structure		.	.	.																																	.	.	.	.
Template SS confidence
					242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions