Job Description P77269 Confidence 98.61% Date Thu Jan 5 12:27:02 GMT 2012 Rank 84 Aligned Residues 238 % Identity 10% Template c3hutA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from rhodospirillum rubrum Resolution 1.93 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																.	.	.	.	.	.	.
Query SS confidence															.	.	.																.	.	.	.	.	.	.
Query Sequence		E	M	T	I	G	A	I	Y	L	D	T	Q	G	.	.	.	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	.	.	.	.	.	.	.	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N
Query Conservation															.	.	.																.	.	.	.	.	.	.
Alig confidence															.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	L	G	Y	E	L	P	L	T	G	A	N	A	A	Y	G	R	V	F	Q	E	A	A	R	L	Q	L	D	R	F	N	A	A	G	G	V	G	G	R	P	V	D	I	L	Y	A	D	S	R	D	D	A	D	Q	A	R	T	I	A	R	A	F	V	D	D	P	R	V	V	G	V	L	G	D	F	S	S	T
Template Known Secondary structure											S	S	S	T	T																					T	T	T	B	T	T	B										T	T																T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	S	R	T	V	R	R	A	S	E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y	V	S	A	Y	L	V	G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	N	C	E	A	F	E	V	C	V	Q	R	R
Query Conservation
Alig confidence																																																								.	.	.	.	.	.									.
Template Conservation																																																								.	.	.	.	.	.									.
Template Sequence		V	S	X	A	A	G	S	I	Y	G	K	E	G	X	P	Q	L	S	P	T	A	A	H	P	D	Y	I	K	I	S	P	W	Q	F	R	A	I	T	T	P	A	F	E	G	P	N	N	A	A	W	X	I	G	D	.	.	.	.	.	.	G	F	T	S	V	A	V	I	.	G	V	T	T	D	W	G	L	S	S	A
Template Known Secondary structure														T						S	S				G	G	G	T	T	S		T	T				S	S			G	G	G												T	.	.	.	.	.	.	T								.			S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.									.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	F	E	E	V	L	K	S	R	V	P	G	A	Q	I	V	A	N	Q	E	G	T	V	L	D	K	A	I	S	V	G	E	K	L	I	I	S	T	P	D	L	N	A	I	M	G	E	S	G	G	A	T	L	G	A	V	K	A	V	R	N	Q	N	Q	A	G	K	I	A	V	F	G	S	D	M	T	T	E	I
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		Q	A	F	R	K	A	F	E	L	R	G	G	A	V	V	V	N	E	E	V	P	P	G	N	R	R	.	.	F	D	D	V	I	D	E	I	E	D	E	A	P	Q	A	I	Y	L	A	X	A	Y	E	D	A	A	P	F	L	R	A	L	R	A	R	G	S	A	L	P	V	Y	G	S	S	A	L	Y	S	P	K	F
Template Known Secondary structure											T	T											T	T				.	.														S						S															T	T									G	G	G		S
Template Predicted Secondary structure																												.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	E	L	E	N	N	Q	V	L	K	A	V	V	D	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	L	G	G	P	A	V	E	G	V	R	L	A	T	A	F
Template Known Secondary structure						G	G	G	G	T	T						S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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