Job Description P77269 Confidence 59.77% Date Thu Jan 5 12:27:02 GMT 2012 Rank 160 Aligned Residues 83 % Identity 13% Template c3gxaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:outer membrane lipoprotein gna1946; PDBTitle: crystal structure of gna1946 Resolution 2.25 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	M	T	I	G	A	I	Y	L	D	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S	S	R	T	V	R	R	A
Query Conservation
Alig confidence											.	.	.																																.	.	.	.	.	.																				.	.	.	.	.
Template Conservation											.	.	.																																.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		K	E	I	V	F	G	T	T	V	.	.	.	G	D	F	G	D	M	V	K	E	Q	I	Q	P	E	L	E	K	K	G	Y	T	V	K	L	V	E	F	T	D	Y	V	.	.	.	.	.	.	R	P	N	L	A	L	A	E	G	E	L	D	I	N	V	F	Q	H	K	.	.	.	.	.	P	Y	L	D	D	F	K
Template Known Secondary structure										T	.	.	.	T									T							T	T	T									S	S	S	S	.	.	.	.	.	.									T	S		S								.	.	.	.	.
Template Predicted Secondary structure											.	.	.																																.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	H	N	L	D	I	T	E	V	F	Q	V	P	T	A	P
Template Known Secondary structure					T											B
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions