Job Description P77269 Confidence 43.33% Date Thu Jan 5 12:27:02 GMT 2012 Rank 180 Aligned Residues 88 % Identity 15% Template c2yxgD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40		.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.
Predicted Secondary structure									.						.	.	.	.																																																			.	.	.	.	.	.
Query SS confidence									.						.	.	.	.																																																			.	.	.	.	.	.
Query Sequence		G	A	I	Y	L	D	T	.	Q	G	Y	Y	A	.	.	.	.	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	.	.	.	.	.	.	V	S	E	N	G	S	S
Query Conservation									.						.	.	.	.																																																			.	.	.	.	.	.
Alig confidence									.						.	.	.	.																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	V	A	V	G	T	T	G	E	S	P	T	L	S	H	E	E	H	K	K	V	I	E	K	V	V	D	V	V	N	G	R	V	Q	V	I	A	G	A	G	S	N	C	T	E	E	A	I	E	L	S	V	F	A	E	D	V	G	A	D	A	V	L	S	I	T	P	Y	Y	N	K	P	T	Q	E	G	L	R	K
Template Known Secondary structure						S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S															T		S									S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	R	R	A	S	E	A	G	I	P	V	I	C	Y	N	T	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F	G	K	V	A	E	S	I	N	L	P	I	V	L	Y	N	V	P
Template Known Secondary structure											S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions