Job Description P77269 Confidence 100.00% Date Thu Jan 5 12:27:02 GMT 2012 Rank 10 Aligned Residues 279 % Identity 16% Template c2x7xA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: fructose binding periplasmic domain of hybrid two component2 system bt1754 Resolution 2.64 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		M	T	I	G	A	I	Y	L	D	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	.	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S	S	R	T	V	R	R	A	S
Query Conservation																														.
Alig confidence																														.								.	.
Template Conservation																																						.	.
Template Sequence		F	R	I	G	V	A	Q	C	S	D	D	S	W	R	H	K	M	N	D	E	I	L	R	E	A	M	F	Y	N	G	V	S	V	E	I	R	.	.	S	A	G	D	D	N	S	K	Q	A	E	D	V	H	Y	F	M	D	E	G	V	D	L	L	I	I	S	A	N	E	A	A	P	M	T	P	I	V	E	E	A	Y
Template Known Secondary structure									S			S															T	T	S	S	S							.	.			T	T															T	T		S							S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		E	A	G	I	P	V	I	C	Y	N	T	C	I	N	Q	K	G	V	D	K	Y	V	S	A	Y	L	V	G	D	P	L	E	F	G	K	K	L	G	N	A	A	A	D	Y	F	I	A	N	K	I	D	Q	P	K	I	A	V	I	.	N	C	E	A	F	E	V	C	V	Q	R	R	K	G	F	E	E	V	L	K	S
Query Conservation																																																												.
Alig confidence																										.	.	.	.	.	.	.	.																											.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		Q	K	G	I	P	V	I	L	V	D	R	K	I	L	S	D	K	Y	T	A	Y	I	G	A	.	.	.	.	.	.	.	.	D	N	Y	E	I	G	R	S	V	G	N	Y	I	A	S	S	L	K	G	K	G	N	I	V	E	L	T	G	L	S	G	S	T	P	A	M	E	R	H	Q	G	F	M	A	A	I	S	K
Template Known Secondary structure			T	T							S	S			S	S	S		S	S						.	.	.	.	.	.	.	.																	T	T	T									S		T	T	S																T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.									.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		R	V	P	G	A	Q	I	V	A	N	Q	E	G	T	V	L	D	K	A	I	S	V	G	E	K	L	I	I	S	T	P	D	L	N	A	I	M	G	E	S	G	G	A	T	L	G	A	V	K	A	V	R	N	Q	N	Q	A	G	K	I	A	V	F	G	S	D	M	.	.	.	T	T	E	I	A	Q	E	L	E	N
Query Conservation																																																																					.	.	.
Alig confidence																																																																					.	.	.
Template Conservation
Template Sequence		F	P	D	I	K	L	I	D	K	A	D	A	A	W	E	R	G	P	A	E	I	E	M	D	S	M	L	R	R	H	P	K	I	D	A	V	Y	A	H	N	D	R	I	A	P	G	A	Y	Q	A	A	K	M	A	G	R	E	K	E	M	I	F	V	G	I	D	A	L	P	G	K	G	N	G	L	E	L	V	L	D
Template Known Secondary structure			T											T	T	S																S								S	S	T	T												T	T		T	T	S	S										S	T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	V	L	K	A	V	V	D	I	S	G	K	K	M	G	N	A	V	F	A	Q	T	L	K	V	I	N	K	Q	A	D	G	E	K	V	I	Q	V	P	I	D	L	Y	T	K	T	E	D	G	K	Q	W	L	A	T	H	V	D
Query Conservation
Alig confidence						.								.	.																			.														.
Template Conservation						.								.	.																			.														.
Template Sequence		S	V	L	D	.	A	T	F	I	Y	P	T	.	.	N	G	D	K	V	L	Q	L	A	M	D	I	L	E	K	K	P	Y	.	P	K	E	T	V	M	N	T	A	V	V	D	R	.	T	N	A	H	V	M	Q	L	Q	T	T	H
Template Known Secondary structure		T	S		S	.								.	.														T	T				.		S											T	.	T	T
Template Predicted Secondary structure						.								.	.																			.														.
Template SS confidence
		263	.	.	.		.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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