Job Description P77269 Confidence 79.49% Date Thu Jan 5 12:27:02 GMT 2012 Rank 134 Aligned Residues 84 % Identity 13% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	R	A	A	E	K	E	M	T	I	G	A	I	Y	L	D	T	Q	G	Y	Y	A	G	V	R	Q	G	V	Q	D	A	A	K	D	S	S	V	Q	V	Q	L	I	E	T	N	A	Q	G	D	I	S	K	E	S	T	F	V	D	T	L	V	A	R	N	V	D	A	I	I	L	S	A	V	S	E	N	G	S
Query Conservation
Alig confidence																		.	.	.	.	.	.																																.	.	.																.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																																.	.	.																.	.	.	.	.	.	.
Template Sequence		A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	.	.	.	.	.	.	Y	K	H	S	I	V	D	K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	L	F	S	S	E	D	E	I	T	.	.	.	T	L	I	S	K	V	K	T	E	N	I	K	I	V	V	.	.	.	.	.	.	.	S	G
Template Known Secondary structure							G	G	G		S							.	.	.	.	.	.		S	S		S	S										T										S	G	G	G			.	.	.									T	T						.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.																																.	.	.																.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	T	V	R	R	A	S	E	A	G	I	P	V	I	C	Y	N	T	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	V	T	D	E	A	I	K	Q	G	L	Y	G	E	T	I	N	S	G
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions