Job Description P24555 Confidence 98.66% Date Thu Jan 5 11:41:42 GMT 2012 Rank 208 Aligned Residues 261 % Identity 11% Template d2madh_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Resolution UNK

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	.	.	.	.	L	P	Y	Q	V	W	R	H	A
Query Conservation																																																																					.	.	.	.
Alig confidence																																																																					.	.	.	.
Template Conservation
Template Sequence		N	D	E	A	P	G	A	D	G	R	R	S	Y	I	N	L	P	A	H	H	S	A	I	I	Q	Q	W	V	L	D	A	G	S	G	S	I	L	G	H	V	N	G	G	F	L	P	N	P	V	A	A	H	S	G	S	E	F	A	L	A	S	T	S	F	S	R	I	A	K	G	K	R	T	D	Y	V	E	V	F	D
Template Known Secondary structure										T	T								G	G	G		S									T	T	T	T										S	S							T	T	S	S										T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	.	.	.	.	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.													.																												.	.	.	.
Template Conservation																																								.																												.	.	.	.
Template Sequence		P	V	T	F	L	P	I	A	D	I	E	L	P	D	A	P	R	F	D	V	G	P	Y	S	W	M	N	A	N	T	P	N	N	A	D	L	L	F	.	F	Q	F	A	A	G	P	A	V	G	L	V	V	Q	G	G	S	S	D	D	Q	L	L	S	S	P	T	.	.	.	.	C	Y	H	I	H	P	G	A	P	S
Template Known Secondary structure		T	T	T				S						T	T						S				T	T	S	S				T	T	S	S	B				.				S	S	S							B	T	T	T	T	B									S	.	.	.	.			S					B	T	T
Template Predicted Secondary structure																																								.																												.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		T	F	Y	L	L	C	A	Q	G	.	.	.	G	L	A	K	T	D	H	A	G	G	A	A	G	A	G	L	V	G	A	M	L	T	A	A	Q	N	L	L	T	Q	P	A	Q	A	N	K	S	G	R	I	V	W	P	V	Y	S	G	K	I	L	Q	A	D	I	S	A	A	G	A	T	N	K	A	P	I	D	A	L
Template Known Secondary structure								S	S	S	.	.	.									T	T											S		T	T	S				S						T	T	T	T							S	S	S									T	T										S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
														315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.								.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	.	.	.	.	.	.	.	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																			.	.	.
Template Conservation																																																													.	.	.
Template Sequence		S	G	G	R	K	A	D	T	W	R	P	G	G	W	Q	Q	V	A	Y	L	K	S	S	D	G	I	Y	L	L	T	S	E	Q	S	A	W	K	L	H	A	A	A	K	E	V	T	S	V	T	G	L	V	G	Q	T	S	S	Q	I	.	.	.	S	L	G	H	D	V	D	A	I	S	V	A	Q	D	G	G	P	D
Template Known Secondary structure								T	T					S	S	S						T	T	T	T											T	T		T	T	S										T	T	T								.	.	.													S	S	S	S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		L	Y	A	L	S	A	G	T	E	.	.	V	L	H	I	Y	D	A	G	A	G	D	Q	D	Q	S	T	V
Template Known Secondary structure							T	T	T	T	.	.							T	T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions