 |
Job Description | P24555 | Confidence | 99.28% | Date | Thu Jan 5 11:41:42 GMT 2012 |
Rank | 117 | Aligned Residues | 129 |
% Identity | 13% | Template | d2d81a1 |
SCOP info | alpha/beta-Hydrolases
| alpha/beta-Hydrolases
| PHB depolymerase-like
|
Resolution | 1.66 |
|
 |
  |   |
521 | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | P | S | L | C | Y | A | M | G | G | S | A | G | G | M | L | M | G | V | A | I | N | Q | R | P | E | L | F | H | G | V | I | A | Q | V | P | F | V | D | V | V | T | T | M | L | D | E | S | I | P | L | T | T | G | E | F | E | E | W | G | N | P | Q | D | P | Q | Y | Y | E | Y | M | K | S | Y | S | P | Y | D | N |
Query Conservation |   |
  |
|   |   |
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |
|
|   |
|
|   |   |
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
| . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
V | N | P | N | S | V | S | V | S | G | L | A | S | G | G | Y | M | A | A | Q | L | G | V | A | Y | S | D | V | F | N | V | G | F | G | V | F | A | G | G | P | Y | D | C | A | . |
. |
. |
R | N | Q | Y | Y | T | S | C | M | Y | N | G | Y | P | S | I | T | T | P | T | A | N | M | K | S | W | S | G | N | Q | I | A | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
| S |  |  |  |  |  | S |
|
|
| T | T | T | T | . | . | . | S | S | S |
| G | G | G | G | S | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | B | T | T | T | B |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
  |   |
601 | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | A | Q | A | Y | P | H | L | L | V | T | T | G | L | H | D | S | Q | V | Q | Y | W | E | P | A | K | W | V | A | K | L | R | E | L | K | T | D | D | H | L | L | L | L | C | T | D | M | D | S | G | H | G |
Query Conservation |   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |
|   |
|
|
|   |   |   |
|   |   |
|   |
|   |
|   |   |   |
|   |   |
|   | . |
|   |   |
|   |   |   |
|
|
|
|
|
Template Sequence |   |
V | A | N | L | G | Q | R | K | I | Y | M | W | T | G | S | S | D | T | T | V | G | P | N | V | M | N | Q | L | K | A | Q | L | G | N | F | D | N | S | A | N | . |
V | S | Y | V | T | T | T | G | A | V | H | T |
Template Known Secondary structure |   |
G | G | G | G | G | G |
|  |  |  |  |  |  |  | T | T |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
| G | G | G | . |  |  |  |  |  |  | T | T |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|