Job Description P24555 Confidence 62.30% Date Thu Jan 5 11:41:42 GMT 2012 Rank 396 Aligned Residues 263 % Identity 12% Template d1sq9a_ SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat Resolution 1.90

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.													170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation													.							.	.	.	.																																																									.	.
Template Sequence		F	S	V	S	A	C	N	S	F	T	V	.	S	C	S	G	D	G	.	.	.	.	Y	L	K	V	W	D	N	K	L	L	D	N	E	N	P	K	D	K	S	Y	S	H	F	V	H	K	S	G	L	H	H	V	D	V	L	Q	A	I	E	R	D	A	F	E	L	C	L	V	A	T	T	S	F	S	G	D	.	.
Template Known Secondary structure								S	S				.				T	T	S	.	.	.	.							S	B			T	T			G	G	G	G								T	T													T	T	T											T	T	S		.	.
Template Predicted Secondary structure													.							.	.	.	.																																																									.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	.	.	.	.	.	.	.	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																						.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	L	L	F	Y	R	I	T	R	E	D	E	T	K	K	V	I	F	E	K	L	D	L	L	D	S	D	M	K	K	H	S	F	W	A	L	K	W	G	A	S	N	S	H	R	L	V	A	T	D	V	K	G	T	T	Y	I	W	K	F	H	P	F	A	D	E	S	N	S	L	T	L	N	W	S	P	T	L	E	L
Template Known Secondary structure		.										T	T	T											S		T	T	G	G	G	S																				T	T	S									S	S	S	S					T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	T	V	E	S	P	M	T	P	S	Q	F	A	T	S	V	D	I	S	E	R	G	L	I	A	T	G	F	N	N	G	T	V	Q	I	S	E	L	S	T	L	R	P	L	Y	N	F	E	S	Q	H	N	N	S	N	S	I	R	S	V	K	F	S	P	Q	G	S	L	L	A	I	A	H	D	S	N	S	F	G
Template Known Secondary structure								S	S	S	S											T	T	S							T	T	S							T	T	T	T																							S	S	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	.	.	.	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q	T	E	V
Query Conservation																										.	.	.
Alig confidence																										.	.	.																				.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		C	I	T	L	Y	E	T	E	F	G	E	R	I	G	S	L	S	V	P	G	E	F	A	H	S	S	W	V	M	S	L	S	F	N	D	S	G	E	T	L	C	S	A	G	W	D	.	.	.	.	G	K	L	R	F	W	D	V	K	T	K	E	R	I	T	T	L	N	M	H	C
Template Known Secondary structure								T	T	T									B				B	S	B	S	S									S	S	S	S							T	T	.	.	.	.	S							T	T	T	T										G
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions