Return to main results Retrieve Phyre Job Id

Job DescriptionP24555
Confidence98.42%DateThu Jan 5 11:41:42 GMT 2012
Rank235Aligned Residues217
% Identity11%Templated1r3da_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Hypothetical protein VC1974
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   423......430.........440.........450.........460.........470.........480.........490.........500..
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK
Query Conservation 
 

  

  
  
         
 

  



       
      
   
  
   
 


 
 
  
  
       
Alig confidence 








.......





















..





























..........
Template Conservation 

    


.......       
 





       ..       
   
  

  

 
 
 
    ..........
Template Sequence  SLLSNQLHF. . . . . . . AKPTARTPLVVLVHGLLGSGAD. . WQPVLSHLARTQCAALTLDLPGHGTNPAEA. . . . . . . . . .
Template Known Secondary structure 



S.......S

BTTB


TT

GGG..GTTSS


TT
SS


..........
Template Predicted Secondary structure 




.......











..














..........
Template SS confidence 















































































   0........ .10.........20.........30 .........40.........50.........60
 
   503......510.........520.........530.........540.........550.........560.........570.........580
Predicted Secondary structure 



























..
Query SS confidence 













































































. .
Query Sequence  NTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEW. .
Query Conservation      
 

    

  
  
  

 
 
 
 

 
        



 
 
   

 
                  
 ..
Alig confidence  ...










































































..
Template Conservation  ...                         
                    
                              
Template Sequence  . . . VEXIEQTVQAHVTSEVPVILVGYSLGGRLIXHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFS
Template Known Secondary structure  ...TT

TTSTTTTTTSS





S
Template Predicted Secondary structure  ...






































Template SS confidence 















































































   68.70.........80.........90.........100.........110.........120.........130.........140....
 
   581........590..... ....600.........610.........620..
Predicted Secondary structure  ................




......................













Query SS confidence  . . . . . . . . . . . . . . . .














. . . . . . . . . . . . . . . . . . . . . .


























Query Sequence  . . . . . . . . . . . . . . . . GNPQDPQYYEYMKSY. . . . . . . . . . . . . . . . . . . . . . SPYDNVTAQAYPHLLVTTGLHDSQVQY
Query Conservation  ................
 
            ......................

   
     
  

  
  
 

  
Alig confidence  ................














......................











.













Template Conservation                                                            
     
. 
 
 
  
     
Template Sequence  QQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHXLLATSLAKQPYLLPALQALKLP. IHYVCGEQDSKFQQ
Template Known Secondary structure  S
TTSGGGTT

TTS
T
GGG



T
SS
.TT
Template Predicted Secondary structure 






















.


Template SS confidence 















































































   145....150.........160.........170.........180.........190.........200......... 210.........220...
 
   623......630.........640.........650.........660.........670.......
Predicted Secondary structure 















Query SS confidence 






















































Query Sequence  WEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLVALAQ
Query Conservation      
    
         
 
      


            
    

     
Alig confidence 




..........






...














..












Template Conservation       ..........      
...   

    
 
   ..   
   
  
  
Template Sequence  LAESS. . . . . . . . . . GLSYSQV. . . AQAGHNVHHEQPQAF. . AKIVQAXIHSIID
Template Known Secondary structure  ..........
S...TT

S

..

Template Predicted Secondary structure 

..........

...






..

Template SS confidence 






















































   224.... .230..... ....240.........250 .........260...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions