Phyre 2 alignment of P24555 with d1pv1a

Job Description P24555
Confidence 99.70% Date Thu Jan 5 11:41:42 GMT 2012

Rank 59 Aligned Residues 257

% Identity 14% Template d1pv1a_

SCOP info alpha/beta-Hydrolases alpha/beta-Hydrolases Hypothetical esterase YJL068C

Resolution 2.30

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.						440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.
Predicted Secondary structure																				.																.	.	.	.	.																																			.
Query SS confidence																				.																.	.	.	.	.																																			.
Query Sequence	V	P	G	F	Y	A	A	N	Y	R	S	E	H	L	W	I	V	A	R	.	D	G	V	E	V	P	V	S	L	V	Y	H	R	K	H	.	.	.	.	.	F	R	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	G	A	S	I	D	A	D	F	S	F	S	R	L	S	L	L	D	R	.	G	F	V	Y	A
Query Conservation																				.																.	.	.	.	.																																			.
Alig confidence																				.																.	.	.	.	.																																			.
Template Conservation
Template Sequence	V	K	E	F	S	V	C	G	G	R	L	I	K	L	S	H	N	S	N	S	T	K	T	S	M	N	V	N	I	Y	L	P	K	H	Y	Y	A	Q	D	F	P	R	N	K	R	I	P	T	V	F	Y	L	S	G	L	T	C	T	P	D	N	A	S	E	K	A	F	W	Q	F	Q	A	D	K	Y	G	F	A	I	V
Template Known Secondary structure							T	T											S	S	S	S	S										T	T	T	T	S				S	S		T	T	B									T	T										S										T
Template Predicted Secondary structure
Template SS confidence
	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

	479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.																	.	.	.	.	510	.	.	.	.	.	.	.	.	.				520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence	I	V	H	V	R	G	G	G	E	L	G	Q	Q	W	Y	E	D	G	K	F	L	K	K	K	N	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	Y	L	D	A	C	D	A	L	L	K	L	G	.	.	.	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence	F	P	D	T	S	P	R	G	D	E	V	A	N	D	P	E	G	S	W	D	F	G	Q	G	A	G	F	Y	L	N	A	T	Q	E	P	Y	A	Q	H	Y	Q	M	Y	D	Y	I	H	K	E	L	P	Q	T	L	D	S	H	F	N	K	L	D	F	L	D	N	V	A	I	T	G	H	S	M	G	G	Y	G	A	I
Template Known Secondary structure				S	S			S	T	T	S				T	T			S	S	S	S	S	S			T	T		B			S					T	T		B							T													B		S	S	S	S							T
Template Predicted Secondary structure
Template SS confidence
	84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

	540	.	.	.	.			.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence	V	A	I	N	Q	.	.	R	P	E	L	F	H	G	V	I	A	Q	V	P	F	V	D	V	V	T	T	M	L	D	E	S	I	P	L	T	T	G	E	F	E	E	W	G	N	P	Q	D	P	Q	Y	Y	E	Y	M	K	S	Y	S	P	Y	D	N	V	T	A	Q	A	Y	P	H	L	L	V	T	T	G	L	H	D
Query Conservation						.	.
Alig confidence						.	.																								.	.	.	.	.													.	.	.	.	.	.
Template Conservation																															.	.	.	.	.													.	.	.	.	.	.
Template Sequence	C	G	Y	L	K	G	Y	S	G	K	R	Y	K	S	C	S	A	F	A	P	I	V	N	P	S	N	V	P	W	G	.	.	.	.	.	Q	K	A	F	K	G	Y	L	G	E	W	E	.	.	.	.	.	.	A	Y	D	P	C	L	L	I	K	N	I	R	H	V	G	D	D	R	I	L	I	H	V	G	D	S	D
Template Known Secondary structure						T	G	G	G	T			S						S					S	T	T	S				.	.	.	.	.								S				G	.	.	.	.	.	.	G	G						G	G	G	S				T	T									T	T
Template Predicted Secondary structure																															.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
	169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

	618	.	620	.	.	.		.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence	S	Q	V	Q	Y	W	.	E	P	A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T	D	M	D	S	G	H	G	G	K	S	G	R	F	K	S	Y	E	G	V	A	M	E	Y	A	F	L	V	A	L	A	Q	G
Query Conservation							.
Alig confidence							.																		.														.	.	.	.
Template Conservation																									.														.	.	.	.
Template Sequence	P	F	L	E	E	H	L	K	P	E	L	L	L	E	A	V	K	A	T	S	W	Q	D	Y	.	V	E	I	K	K	V	H	G	F	D	H	S	Y	.	.	.	.	Y	F	V	S	T	F	V	P	E	H	A	E	F	H	A	R	N	L	G	L
Template Known Secondary structure	T	T	T	T	T	T			T								T	T	S	T	T	T	T	S	.							T	T			S	S		.	.	.	.																		T	T
Template Predicted Secondary structure																									.														.	.	.	.
Template SS confidence
	242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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