Job Description P24555 Confidence 97.63% Date Thu Jan 5 11:41:42 GMT 2012 Rank 277 Aligned Residues 250 % Identity 11% Template d1pbyb_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Quinohemoprotein amine dehydrogenase B chain Resolution 1.70

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	D	N	V	E	P	S	F	.	.	.	.	.	.	.	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																							.	.	.	.																									.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		P	M	V	P	M	V	A	P	G	G	R	I	A	Y	A	T	V	N	K	S	E	.	.	.	.	S	L	V	K	I	D	L	V	T	G	E	T	L	G	R	I	D	L	S	T	P	E	E	R	V	K	S	L	F	G	A	A	L	S	P	D	G	K	T	L	A	I	Y	E	S	P	V	R	L	E	L	T	H	F	E
Template Known Secondary structure									T	T	S	S							T	T	T	T	.	.	.	.							T	T	T											B	T	T						T	T						T	T	S	S													S	S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
				198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L
Query Conservation		.	.
Alig confidence		.	.													.	.	.	.																															.	.	.	.	.																									.
Template Conservation																.	.	.	.																															.	.	.	.	.																									.
Template Sequence		V	Q	P	T	R	V	A	L	Y	D	A	E	T	L	.	.	.	.	S	R	R	K	A	F	E	A	P	R	Q	I	T	M	L	A	W	A	R	D	G	S	K	L	Y	G	L	G	R	D	.	.	.	.	.	L	H	V	M	D	P	E	A	G	T	L	V	E	D	K	P	I	Q	S	W	E	A	E	T	.	Y	A
Template Known Secondary structure												T	T	T	T	.	.	.	.										S	S								T	T	S	S						S	S	S	.	.	.	.	.						T	T	T	T								S	T	T	T	T	T	T	T	.	B
Template Predicted Secondary structure																.	.	.	.																															.	.	.	.	.																									.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.										.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Query Sequence		D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	.	.	.	.	.	.	.	.	.	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	D	V	L	A	V	W	N	Q	H	E	S	S	G	V	M	A	T	P	F	Y	T	A	R	K	D	I	D	P	A	D	P	T	A	Y	R	T	G	L	L	T	M	D	L	E	T	G	E	M	A	M	R	E	V	R	I	M	D	V	F	Y	F	S	T	A	V	N	P	A	K	T	R	A	F	G	A	Y	N	V
Template Known Secondary structure				B									T	T	T	T										B	T	T	S		T	T	S	G	G	G										T	T	T												S	S									T	T	S	S							S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R
Query Conservation
Alig confidence																	.	.	.																									.	.	.	.
Template Conservation																	.	.	.																									.	.	.	.
Template Sequence		L	E	S	F	D	L	E	K	N	A	S	I	K	R	V	.	.	.	P	L	P	H	S	Y	Y	S	V	N	V	S	T	D	G	S	T	V	W	L	G	G	A	L	.	.	.	.	G	D	L	A	A	Y	D	A	E	T	L	E	K	K
Template Known Secondary structure							T	T	T	T							.	.	.			S	S									T	T	S							S	B	S	.	.	.	.	S							T	T	T
Template Predicted Secondary structure																	.	.	.																									.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions