Phyre 2 alignment of P24555 with d1gxra

Job Description P24555
Confidence 90.60% Date Thu Jan 5 11:41:42 GMT 2012

Rank 363 Aligned Residues 288

% Identity 7% Template d1gxra_

SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat

Resolution 1.65

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence	M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	.	E	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I	G
Query Conservation																																								.
Alig confidence																							.	.	.	.														.																								.				.	.	.	.
Template Conservation																							.	.	.	.																																						.				.	.	.	.
Template Sequence	A	Y	S	F	H	V	T	A	D	G	Q	M	Q	P	V	P	F	P	P	D	A	L	.	.	.	.	I	G	P	G	I	P	R	H	A	R	Q	I	N	T	L	N	H	G	E	V	V	C	A	V	T	I	S	N	P	T	R	H	V	Y	T	G	G	.	K	G	C	.	.	.	.	V	K	V	W	D	I	S	H	P
Template Known Secondary structure								S	S	S									T	T	S	S	.	.	.	.	S	S	T	T			S											S	S									S	S	S	S							.	B	S		.	.	.	.						T	T	S	T
Template Predicted Secondary structure																							.	.	.	.																																						.				.	.	.	.
Template SS confidence
	445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.					.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.		.	.	.					.	.	.	510	.	.	.	.	.

	208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N
Query Conservation
Alig confidence																																						.	.	.
Template Conservation																																						.	.	.
Template Sequence	G	N	K	S	P	V	S	Q	L	D	C	L	N	R	D	N	Y	I	R	S	C	K	L	L	P	D	G	C	T	L	I	V	G	G	E	A	S	.	.	.	T	L	S	I	W	D	L	A	A	P	R	I	K	A	E	L	T	S	S	A	P	A	C	Y	A	L	A	I	S	P	D	S	K	V	C	F	S	C	C	S
Template Known Secondary structure	T			S		S						S		T	T	S	B								T	T	S	S							S	S	S	.	.	.																			S	S	S									T	T	S	S							T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
	516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.				.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.

	288	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.																																																																					.	.	.	.
Query SS confidence				.	.	.	.	.																																																																					.	.	.	.
Query Sequence	R	H	G	.	.	.	.	.	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	.	.	.	.
Query Conservation				.	.	.	.	.																																																																					.	.	.	.
Alig confidence				.	.	.	.	.																																																																					.	.	.	.
Template Conservation
Template Sequence	D	G	N	I	A	V	W	D	L	H	N	Q	T	L	V	R	Q	F	Q	G	H	T	D	G	A	S	C	I	D	I	S	N	D	G	T	K	L	W	T	G	G	L	D	N	T	V	R	S	W	D	L	R	E	G	R	Q	L	Q	Q	H	D	F	T	S	Q	I	F	S	L	G	Y	C	P	T	G	E	W	L	A	V
Template Known Secondary structure	T	S							T	T	T	T										S	S									T	T	S	S							T	T	S							T	T	T	T									S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
	595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.

																							359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q	T	E	V	P	G	F	Y	A	A	N	Y	R	S
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence	G	M	E	S	S	N	V	E	V	L	H	V	N	K	P	D	K	Y	Q	L	H	L	H	E	S	C	V	L	S	L	K	F	A	Y	C	G	K	W	F	V	S	T	G	K	D	.	.	.	.	N	L	L	N	A	W	R	T	P	Y	G	A	S	I	F	Q	S	K	E	S	S	S	V	L	S	C	D	I	S	V	D
Template Known Secondary structure			T	T	S							T	T	S	S									S	S									T	T	S	S							T	T	.	.	.	.	S							T	T	T										S	S									T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
	675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.					720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750

	417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	H	L	W	I	V	A	R	D	G	V	E	V	P	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence	D	K	Y	I	V	T	G	S	G	D	K	K	A	T	V	Y
Template Known Secondary structure	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
	751	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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