Job Description P24555 Confidence 98.94% Date Thu Jan 5 11:41:42 GMT 2012 Rank 158 Aligned Residues 233 % Identity 10% Template c3u1tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dmma haloalkane dehalogenase; PDBTitle: haloalkane dehalogenase, dmma, of marine microbial origin Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	N	Y	R	S	E	H	L	W	I	V	A	R	D	G	V	E	V	P	V	S	L	V	Y	H	R	K	H	F	R	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	G	A	S	I	D	A	D	F	S	F	S	R	L	S	L	L	D	R	G	F	V	Y	A	I	V	H	V	R	G	G	G	E	L	G	Q
Query Conservation
Alig confidence															.											.	.	.	.	.	.	.	.																			.	.																												.
Template Conservation															.											.	.	.	.	.	.	.	.																			.	.																												.
Template Sequence		S	S	E	F	P	F	A	K	R	T	V	E	V	.	E	G	A	T	I	A	Y	V	D	E	.	.	.	.	.	.	.	.	G	S	G	Q	P	V	L	F	L	H	G	N	P	T	S	S	Y	L	.	.	W	R	N	I	I	P	Y	V	V	A	A	G	Y	R	A	V	A	P	D	L	I	G	X	G	D	S	A	.
Template Known Secondary structure															.	T	T									.	.	.	.	.	.	.	.			S	S								T	T			G	G	G	.	.	G	T	T	T							T	T									T	T	S	T	T	S		.
Template Predicted Secondary structure															.											.	.	.	.	.	.	.	.																			.	.																												.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	Y	E	D	G	K	F	L	K	K	K	N	T	F	N	D	Y	L	D	A	C	D	A	L	L	K	L	G	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G	V	A	I	N	Q	R	P	E	L	F	H	G	V	I	A	Q	V	P	F	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																									.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																									.	.
Template Sequence		.	.	.	.	.	.	.	K	P	D	I	E	Y	R	L	Q	D	H	V	A	Y	X	D	G	F	I	D	A	L	G	L	.	.	D	D	X	V	L	V	I	H	D	W	G	S	V	I	G	X	R	H	A	R	L	N	P	D	R	V	A	A	V	A	F	X	E	A	L	V	P	P	A	L	P	X	P	S	Y	E	A
Template Known Secondary structure		.	.	.	.	.	.	.			S	S																			T		.	.		S																					T	T	T										S		T	T	T		S	B	S		S	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.
Template SS confidence
									112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
																																																	559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	V	V	T	T	M	L	D	E	S	I	P	L	T	T	G	E	F	E	E	W	G	N	P	Q	D	P	Q	Y	Y	E	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	G	P	Q	L	G	P	L	F	R	D	L	R	T	A	D	V	G	E	K	X	V	L	D	G	N	F	F	V	E	T	I	L	P	E	X	G	V	V	R	S	L	S	E	A	E	X	A	A	Y	R	A	P	F	P	T	R	Q	S	R	L	P	T	L	Q	W	P	R	E	V	P	I	G	G	E	P	A	F	A	E
Template Known Secondary structure		G												T	S	T	T							T	T	T						T					T	S		S	S												T	T			S	T	G	G	G										S		B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	S	Y	S	P	Y	D	N	V	T	A	Q	A	Y	P	H	L	L	V	T	T	G	L	H	D	S	Q	V	Q	Y	W	E	P	A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T	D	M	D	S	G	H	G	G	K	S	G	R	F	K	S	Y	E	G	V	A	M	E	Y	A	F
Query Conservation
Alig confidence																		.																													.	.	.	.	.	.	.																				.	.
Template Conservation																		.																													.	.	.	.	.	.	.																				.	.
Template Sequence		A	E	V	L	K	N	G	E	W	L	X	A	S	P	I	P	.	K	L	L	F	H	A	E	P	G	A	L	A	P	K	P	V	V	D	Y	L	S	E	N	V	P	N	L	E	.	.	.	.	.	.	.	V	R	F	V	G	A	G	T	H	F	L	Q	E	D	H	P	H	L	I	.	.	G	Q	G	I	A	D	W
Template Known Secondary structure																S		.										S	S	S												S	T	T			.	.	.	.	.	.	.								S	S											.	.
Template Predicted Secondary structure																		.																													.	.	.	.	.	.	.																				.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.								.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.
		672	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		333	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions