Job Description P24555 Confidence 99.43% Date Thu Jan 5 11:41:42 GMT 2012 Rank 104 Aligned Residues 203 % Identity 13% Template c3u0vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lysophospholipase-like protein 1; PDBTitle: crystal structure analysis of human lyplal1 Resolution 1.72 Å

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		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.						.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.								.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		V	P	V	S	L	V	Y	H	R	K	H	F	R	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	G	A	S	I	D	A	D	F	S	F	S	R	L	S	L	L	D	R	.	.	.	.	.	G	F	V	Y	A	I	V	H	V	R	G	G	G	E	L	G	Q	Q	.	.	.	.	.	.	.	W	Y	E	D	G
Query Conservation																																															.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence												.	.	.	.																	.	.														.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation												.	.	.	.																	.	.
Template Sequence		L	Q	R	C	I	V	S	P	A	G	.	.	.	.	R	H	S	A	S	L	I	F	L	H	G	S	G	D	S	G	.	.	Q	G	L	R	M	W	I	K	Q	V	L	N	Q	D	L	T	F	Q	H	I	K	I	I	Y	P	T	A	P	P	R	S	Y	T	P	M	K	G	G	I	S	N	V	W	F	D	R	F	K
Template Known Secondary structure										S	S	.	.	.	.												T	T				.	.												T	S					S	S														G	G	G	T	T						S	S			S	S
Template Predicted Secondary structure												.	.	.	.																	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.							.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		K	F	L	K	K	K	N	T	F	N	D	Y	L	D	A	C	D	A	L	L	K	.	.	.	.	.	.	L	G	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G	V	A	I	N	Q	R	P	E	L	F	H	G	V	I	A	Q	V	P	F	V	D	V	V	T	T	M	L	D	E	S	I
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																																																.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		I	T	N	D	C	P	E	H	L	E	S	I	D	V	M	C	Q	V	L	T	D	L	I	D	E	E	V	K	S	G	I	K	K	N	R	I	L	I	G	G	F	S	M	G	G	C	M	A	M	H	L	A	Y	R	N	H	Q	D	V	A	G	V	F	A	L	S	S	F	L	N	K	A	S	A	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	S	S																								T	T			G	G	G							T															T	T	S	S						S					T	T			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	T	G	E	F	E	E	W	G	N	P	Q	D	P	Q	Y	Y	E	Y	M	K	S	Y	S	P	Y	D	N	V	T	A	Q	A	Y	P	H	L	L	V	T	T	G	L	H	D	S	Q	V	Q	Y	W	E	P	A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T	D	M	D	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	Q	A	L	Q	K	S	N	G	V	L	P	E	.	L	F	Q	C	H	G	T	A	D	E	L	V	L	H	S	W	A	E	E	T	N	S	M	L	K	S	L	G	V	T	.	.	.	T	K	F	H	S	F	P	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S					.							T	T		S	S	S															T	T			.	.	.							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																															.	.	.
Template SS confidence
																									157	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	G	G	K	S	G	R	F	K	S	Y	E	G	V	A	M	E	Y	A	F	L	V	A	L	A
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		Y	H	E	L	S	.	.	.	.	.	.	K	T	E	L	D	I	L	K	L	W	I	L	T	K	L
Template Known Secondary structure			S	S			.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions