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Job DescriptionP24555
Confidence98.57%DateThu Jan 5 11:41:42 GMT 2012
Rank220Aligned Residues228
% Identity12%Templatec3qyjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alr0039 protein; PDBTitle: crystal structure of alr0039, a putative alpha/beta hydrolase from2 nostoc sp pcc 7120.
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   418.420.........430.........440.........450.........460.........470.........480.........490.......
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Query Sequence  HLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGK
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Template Sequence  EQTIVDTTEARINLVKA. . . . . . . . GHGAPLLLLHGYPQTHVMWHKIAPLL. . . ANNFTVVATDLRGYGDSSRP. . . ASV
Template Known Secondary structure 
SS
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TT

GGGGTTT...TTT

TTSTTS


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   6...10.........20.. .......30.........40........ .50.........60........ .70.
 
   498.500.........510.........520.........530.........540.........550.........560.........570.......
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Query Sequence  FLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEF
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Template Sequence  PHHINYSKRVMAQDQVEVMSKLGY. . EQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYH
Template Known Secondary structure  GGGGGGSTT
..SST
TTTS


T

TT
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   72.......80.........90..... ....100.........110.........120.........130.........140.........
 
   578.580.........590.. .......600...
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Query Sequence  EEWGNPQDPQYYEYM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KSYSPYDNVTA
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Template Sequence  WFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQK
Template Known Secondary structure  TT
STTT

S
GGGS
TSTTTTT

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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   604.....610.........620.........630.........640.........650.........660.........
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Query Sequence  QAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEY
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Template Sequence  ISCP. VLVLWGEKGIIGRKYDVLATWRER. . . . AIDVSGQS. . . LPCGHFLPEEAPEETYQAIYNF
Template Known Secondary structure  B
S
.TTSSS
TT....BSS...SSSS
S
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   230... ......240.........250....... ..260..... ....270.........280.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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