Job Description P24555 Confidence 96.90% Date Thu Jan 5 11:41:42 GMT 2012 Rank 302 Aligned Residues 220 % Identity 8% Template c3qqzA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:putative uncharacterized protein yjik; PDBTitle: crystal structure of the c-terminal domain of the yjik protein from2 escherichia coli cft073 Resolution 2.55 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		D	E	W	E	T	L	L	D	A	N	K	R	A	A	H	S	E	F	Y	S	M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	D	N	V	E	P	.	.	S	F	V	W	A	N	D	S	W	I	F
Query Conservation																																																																					.	.
Alig confidence																				.	.																						.	.	.	.																							.	.
Template Conservation																				.	.																						.	.	.	.
Template Sequence		Q	N	Y	H	A	T	I	D	G	K	E	I	A	G	I	T	N	N	.	.	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	.	.	.	.	A	I	V	E	X	T	T	N	G	D	L	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V
Template Known Secondary structure		T	T											T	T			S		.	.								T	T	T	T								T	T		.	.	.	.							T	T										S	S		S	S								S	T	T
Template Predicted Secondary structure																				.	.																						.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.							.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	.	.	.	.	.	.	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E
Query Conservation																																								.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		I	S	D	E	R	D	Y	A	.	.	.	.	.	.	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	E	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L
Template Known Secondary structure					T	T	T	T		.	.	.	.	.	.								T	T														S	S				S	S									T	T	T	T								S	S	S								S	T	T		S	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		261	.	.	.	.	.	.								.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Query Sequence		P	F	V	F	L	P	R	.	.	.	.	.	.	.	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	.	.	.	.	.	.	G	F	T	L	F	T	D	W
Query Conservation									.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																								.	.	.																											.	.	.	.	.	.
Template Conservation																																							.	.	.
Template Sequence		H	I	S	K	D	K	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	.	.	.	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	X	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	X	D	A	S	G
Template Known Secondary structure												T			S	S									T	T	T	T							T	T	T	T	.	.	.							T	T										S	T	T	G	G	G		S	S				S								T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		N	I	Y	I	V	S	E	P	N	.	.	R	F	Y	R	F	T	P
Template Known Secondary structure								T	T	T	.	.
Template Predicted Secondary structure											.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions