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Job DescriptionP24555
Confidence98.29%DateThu Jan 5 11:41:42 GMT 2012
Rank248Aligned Residues217
% Identity13%Templatec3qmwD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:thioesterase; PDBTitle: redj with peg molecule bound in the active site
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   436...440.........450.........460.........470.........480.........490.........500.........510.....
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Query Sequence  HRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDAL
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Template Sequence  AEPPDPAAAPLRLVCFPYAGGTV. . SAFRGWQERLGD. EVAVVPVQLPGRGLRL. . . . . . . . RERPYDTMEPLAEAVADA
Template Known Secondary structure 




TTS
S

TT

G..GGGTT
S.S


TTSGGGT........TS



S
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   23......30.........40..... ....50....... ..60.........70... ......80.........90.
 
   516...520.........530.........540.........550.........560.........570.........580 .....
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Query Sequence  LKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEW. . . . . . . . . . GNPQD
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Template Sequence  LEEHRLTH. DYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDTLG
Template Known Secondary structure  TTT
SS.STTT



S
S


GGG
SS


TTS
TTS



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   92....... 100.........110.........120.........130.........140.........150.........160.........170
 
   586...590.........600.. .......610.........620.........630.........640.........650.....
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Query Sequence  PQYYEYMKSYSPYDNVT. . . . . . . . . . AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK
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Template Sequence  AAYFDRRLPVLRADLRACERYDWHPRPPLDCP. TTAFSAAADPIATPEMVEAWRPYTTGS. . . . . . FLRRHLPG. NHFFL
Template Known Secondary structure  TS







BSS
.TT
STT
TTGGGBSS
......SS.
TTGG
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   173......180.........190.........200.... .....210.........220.........230. ........ 240....
 
   656...660.........670..
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Query Sequence  SGRFKSYEGVAMEYAFL
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Template Sequence  NGGPSRDRLLAHLGTEL
Template Known Secondary structure  GSS
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   245....250.........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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