 |
Job Description | P24555 | Confidence | 96.95% | Date | Thu Jan 5 11:41:42 GMT 2012 |
Rank | 300 | Aligned Residues | 128 |
% Identity | 20% | Template | c3n2zB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:lysosomal pro-x carboxypeptidase; |
PDBTitle: the structure of human prolylcarboxypeptidase at 2.80 angstroms2 resolution
|
Resolution | 2.79 Å |
|
 |
  |   |
432 | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | |
|
|
. | . | . | . | . | 490 | . | . | |
|
|
. | . | . | . | . | . | . | 500 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | V | Y | H | R | K | H | F | R | K | G | H | N | P | L | L | V | Y | G | Y | G | S | Y | G | A | S | I | D | A | D | F | S | F | S | R | L | S | L | L | D | R | G | F | V | Y | A | I | V | H | V | R | G | . |
. |
. |
G | G | E | L | G | Q | Q | W | . |
. |
. |
Y | E | D | G | K | F | L | K | K | K | N | T | F |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
| . | . | . |
|   |
|   |
|   |   |
| . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|
|
Template Sequence |   |
Y | L | V | A | D | K | Y | W | K | K | N | G | G | S | I | L | F | Y | T | G | N | E | G | D | I | I | W | F | C | N | N | T | G | F | M | W | D | V | A | E | E | L | K | A | M | L | V | F | A | E | H | R | Y | Y | G | E | S | L | P | F | G | D | N | S | F | K | D | S | R | H | L | N | F | L | T | S | E | Q | A | L |
Template Known Secondary structure |   |
 |  |  |  |
| T | T |
|
| T | T | T |
|  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |
|
| T | T | S | T | T |
|
| T | T | G | G | G | G | G | S |
| T | T | T | S | T | T |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
506 | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | |
. | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | Y | L | D | A | C | D | A | L | L | K | L | G | Y | G | S | P | S | . |
L | C | Y | A | M | G | G | S | A | G | G | M | L | M | G | V | A | I | N | Q | R | P | E | L | F | H | G | V | I | A | Q | V | P | F | V |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   | . |
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|
|
|   |
|   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|
|
Template Sequence |   |
A | D | F | A | E | L | I | K | H | L | K | R | T | I | P | G | A | E | N | Q | P | V | I | A | I | G | G | S | Y | G | G | M | L | A | A | W | F | R | M | K | Y | P | H | M | V | V | G | A | L | A | A | S | A | P | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | G | G | G |
|
|  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
| S |  |  |  |  |  | T |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|