Job Description P24555 Confidence 96.50% Date Thu Jan 5 11:41:42 GMT 2012 Rank 311 Aligned Residues 240 % Identity 7% Template c3lrvA_ PDB info PDB header:splicing Chain: A: PDB Molecule:pre-mrna-splicing factor 19; PDBTitle: the prp19 wd40 domain contains a conserved protein interaction region2 essential for its function. Resolution 2.60 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	.	.	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P
Query Conservation																																									.	.
Alig confidence																			.	.	.	.	.																		.	.																									.	.	.	.	.	.							.	.
Template Conservation																			.	.	.	.	.																																												.	.	.	.	.	.							.	.
Template Sequence		I	I	S	R	G	P	C	N	R	L	L	L	L	Y	P	G	N	.	.	.	.	.	Q	I	T	I	L	D	S	K	T	N	K	V	L	R	E	I	E	V	D	S	A	N	E	I	I	Y	M	Y	G	H	N	T	E	Y	F	I	W	A	D	N	R	G	T	.	.	.	.	.	.	I	G	F	Q	S	Y	.	.	E
Template Known Secondary structure							S	T	T							T	T	T	.	.	.	.	.							T	T	T												S	S																		T	T			.	.	.	.	.	.						S	.	.	S
Template Predicted Secondary structure																			.	.	.	.	.																																												.	.	.	.	.	.							.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.			.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H
Query Conservation
Alig confidence																																						.	.	.
Template Conservation																																						.	.	.
Template Sequence		D	D	S	Q	Y	I	V	H	S	A	K	S	D	V	E	Y	S	S	G	V	L	H	K	D	S	L	L	L	A	L	Y	S	P	D	G	I	.	.	.	L	D	V	Y	N	L	S	S	P	D	Q	A	S	S	R	F	P	V	D	E	E	A	K	I	K	E	V	K	F	A	D	N	G	Y	W	M	V	V	E	C	D
Template Known Secondary structure		S	S										S	S										T	T	S								T	T	S		.	.	.						S	S		T	T	S									T	T	S									T	T	S	S							S
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		Q	.	.	.	T	V	V	C	F	D	L	R	K	D	V	G	T	L	A	Y	P	T	Y	T	I	G	T	V	T	Y	D	I	D	D	S	G	K	N	M	I	A	Y	S	N	E	S	N	S	L	T	I	Y	K	F	D	K	K	T	K	N	W	T	K	D	E	E	S	A	L	C	L	A	D	F	T	D	M	D	V	V
Template Known Secondary structure		S	.	.	.	B						T	T	S	S	T	T		B	S	S				B										T	T	S	S							T	T	T	T									T	T	T		S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		395				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	G	D	G	G	I	A	A	I	L	K	T	N	D	S	F	N	I	V	A	L
Template Known Secondary structure				T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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