Job Description P24555 Confidence 91.19% Date Thu Jan 5 11:41:42 GMT 2012 Rank 361 Aligned Residues 255 % Identity 9% Template c3i2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 92; PDBTitle: crystal structure of wd40 repeats protein wdr92 Resolution 1.95 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																									.	.	.													.	.	.
Query SS confidence																																									.	.	.													.	.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	.	.	.	E	L	L	D	N	V	E	P	S	F	V	W	.	.	.	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W
Query Conservation																																									.	.	.													.	.	.
Alig confidence																		.	.	.																					.	.	.													.	.	.																.	.	.	.	.	.
Template Conservation																		.	.	.																																																						.	.	.	.	.	.
Template Sequence		V	F	D	C	K	W	V	P	C	S	A	K	F	V	T	M	.	.	.	G	N	R	G	T	G	V	I	Q	L	Y	E	I	Q	H	G	D	L	K	L	L	R	E	I	E	K	A	K	P	I	K	C	G	T	F	G	A	T	S	L	Q	Q	R	Y	L	A	T	G	D	F	G	G	N	.	.	.	.	.	.	L	H
Template Known Secondary structure									T	T	S	S						.	.	.															S	S	S										S	S								T	T			T	T	T								T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.																																																						.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.							90	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	.	.	.	.	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	W	N	L	E	A	P	E	M	P	V	Y	S	V	K	G	H	K	E	I	I	N	A	I	D	G	I	G	G	L	G	I	G	E	G	A	P	E	I	V	T	G	S	R	D	G	T	V	K	V	W	D	P	R	Q	K	D	D	P	V	A	N	M	E	P	V	Q	G	E	N	K	R	D	C	W	T	V	A	F	G
Template Known Secondary structure					T	T	S		S	S		S							S	S									S	G	G	G			.										T	T	S							T	T	S		S	S		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
																	246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	.	.	.	W	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.
Template Conservation
Template Sequence		N	A	Y	N	Q	E	E	R	V	V	C	A	G	Y	D	N	G	D	I	K	L	F	D	L	R	N	M	A	L	R	W	E	T	N	I	K	N	G	V	C	S	L	E	F	D	R	K	D	I	S	M	N	K	L	V	A	T	S	L	E	G	K	F	H	V	F	D	M	R	T	Q	H	P	T	K	G	F	A	S	V
Template Known Secondary structure						.										T	T	S							T	T	T	T									S	S								S		S	S	S	S									S	T	T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.														.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	K	A	H	K	S	T	V	W	Q	V	R	H	L	P	Q	N	R	E	L	F	L	T	A	G	G	A	G	G	L	H	L	W	K	Y	E	Y	P	I	Q	R	K	D	S	E	G	I	E	M	G	V	A	G	S	V	S	L	L	Q	N	V	T	L	S	T	Q	P	I	S	S	L	D	W	S	P	D	K	R	G
Template Known Secondary structure							S	S									T	T										T	T	S											S					T	T	S																			S	S									S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T
Query Conservation
Alig confidence										.	.	.
Template Conservation										.	.	.
Template Sequence		L	C	V	C	S	S	F	D	.	.	.	Q	T	V	R	V	L	I	V	T	K
Template Known Secondary structure								T	T	.	.	.	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.				.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions