Job Description P24555 Confidence 26.48% Date Thu Jan 5 11:41:42 GMT 2012 Rank 463 Aligned Residues 266 % Identity 10% Template c3hrpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics protein of unknown function2 (np_812590.1) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a3 resolution Resolution 1.70 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	H	S	E	F	Y	S	M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q
Query Conservation
Alig confidence																														.	.	.	.	.																																										.	.	.	.
Template Conservation																														.	.	.	.	.																																										.	.	.	.
Template Sequence		L	A	S	A	K	F	K	Y	X	W	G	I	A	A	V	G	N	N	T	V	L	A	Y	Q	R	D	D	P	.	.	.	.	.	R	V	R	L	I	S	V	D	D	N	K	V	T	T	V	H	P	G	F	K	G	G	K	P	A	V	T	K	D	K	Q	R	V	Y	S	I	G	W	E	G	T	.	.	.	.	H	T
Template Known Secondary structure		T	T	T													S	T	T							T	T	T	T	.	.	.	.	.							T	T	T	T								T			B		B					T	T	S	S						B	S	S	T	T	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																																										.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																	.
Predicted Secondary structure																												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	.	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Query Conservation																												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																			.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		V	Y	V	Y	X	K	A	S	G	W	A	P	T	R	I	G	Q	L	G	S	T	F	S	G	K	I	G	A	V	A	L	D	E	T	E	E	W	L	Y	F	V	D	S	N	K	.	.	.	N	F	G	R	F	N	V	K	T	Q	E	V	T	L	I	K	Q	L	E	L	S	G	S	L	G	T	N	P	G	P	Y	L
Template Known Secondary structure							G	G	G	T	T										T	T	S		S				B					T	T	S	S							T	T		.	.	.							T	T	T													S					S	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		I	Y	Y	F	V	D	S	N	F	Y	X	S	D	Q	N	L	S	S	V	Y	K	I	T	P	D	G	.	.	E	C	E	W	F	C	G	S	A	T	Q	K	T	V	Q	D	G	L	R	E	E	A	L	F	A	Q	P	N	G	X	T	V	D	E	D	G	N	F	Y	I	V	D	G	F	K	G	Y	C	L	R	K	L
Template Known Secondary structure					T	T	T	T							T	T	T	T							T	T		.	.									T	T			S		B				G	G	G		B		S	S								T	T								T	T	T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		D	I	L	D	G	Y	V	S	T	V	A	G	Q	V	D	V	A	S	Q	I	D	G	T	P	L	E	A	T	F	N	Y	P	Y	D	I	C	Y	D	G	E	.	.	G	G	Y	W	I	A	E	A	W	G	K	A	I	R	K	Y	A
Template Known Secondary structure			T	T	T	T									T	T		B	S				B	S	T	T	T			B	S	S								S	S	.	.	S							S	T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions