Job Description P24555 Confidence 99.59% Date Thu Jan 5 11:41:42 GMT 2012 Rank 82 Aligned Residues 228 % Identity 14% Template c3h04A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 staphylococcus aureus subsp. aureus mu50 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		H	L	W	I	V	A	R	D	G	V	E	V	P	V	S	L	V	Y	H	R	K	H	F	R	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	.	G	A	S	I	D	A	D	F	S	F	S	R	L	S	L	L	D	R	G	F	V	Y	A	I	V	H	V	R	G	G	G	E	L	G	Q	Q	W	Y	E	D	G
Query Conservation																																								.
Alig confidence																							.	.	.															.																																								.	.
Template Conservation																							.	.	.																																																							.	.
Template Sequence		K	Y	K	V	I	T	K	D	A	F	A	L	P	Y	T	I	I	K	A	K	N	.	.	.	Q	P	T	K	G	V	I	V	Y	I	H	G	G	G	L	M	F	G	K	A	N	D	L	S	P	Q	Y	I	D	I	L	T	E	H	Y	D	L	I	Q	L	S	Y	R	L	L	P	E	V	S	L	D	C	I	I	.	.
Template Known Secondary structure								T	T	S											S	S	.	.	.	S	S		S									S	T	T	T	S			T	T		S									T	T	T											T	T	T	S							.	.
Template Predicted Secondary structure																							.	.	.																																																							.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	L	K	K	K	N	T	F	N	D	Y	L	D	A	C	D	A	L	L	K	L	G	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G	V	A	I	N	Q	R	P	E	L	F	H	G	V	I	A	Q	V	P	F	V	D	V	V	T	T	M	L	D	E	S	I	P	L	T	T	G	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.													.	.																																																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.													.	.																																																.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	D	V	Y	A	S	F	D	A	I	Q	S	.	.	Q	Y	S	N	C	P	I	F	T	F	G	R	S	S	G	A	Y	L	S	L	L	I	A	R	D	R	D	I	D	G	V	I	D	F	Y	G	Y	S	R	I	N	T	E	P	F	K	T	.	.	.	.	.	.	T	N	S	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.													.	.	T	T	T	T	S								T													S			S						S			S		S		S					S	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.	.																																																.	.	.	.	.	.
Template SS confidence
											80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.																																							.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	E	W	G	N	P	Q	D	P	Q	Y	Y	E	Y	M	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	P	Y	D	N	V	T	A	Q	A	Y	P	H	L	L	V	T	T	G	L	H	D	S
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																							.
Template Sequence		Y	A	K	I	A	Q	S	I	N	E	T	M	I	A	Q	L	T	S	P	T	P	V	V	Q	D	Q	I	A	Q	R	F	L	I	Y	V	Y	A	R	G	T	G	K	W	I	N	M	I	N	I	A	D	Y	T	D	S	K	Y	N	I	A	P	D	E	L	K	T	L	P	P	.	V	F	I	A	H	C	N	G	D	Y
Template Known Secondary structure							T	T	S							T	T	S		S	S			S	S		S	S	G	G	G											T									S		T	T	S	G	G	G	S							T	T				.							T	T		S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.		.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Q	V	Q	Y	W	E	P	A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T	D	M	D	S	G	H	G	G	K	S	G	R	F	K	S	Y	E	G	V	.	A	M	E	Y	A	F	L	V	A	L
Query Conservation																																																	.
Alig confidence									.	.	.	.																.	.	.																			.
Template Conservation									.	.	.	.																.	.	.
Template Sequence		D	V	P	V	E	E	S	.	.	.	.	E	H	I	M	N	H	V	P	H	S	T	F	E	R	V	.	.	.	N	K	N	E	H	D	F	D	R	R	P	N	D	E	A	I	T	I	Y	R	K	V	V	D	F	L	N	A	I
Template Known Secondary structure		S	S		T				.	.	.	.					T	T		S	S							.	.	.		S	S		S		T	T	S	S
Template Predicted Secondary structure									.	.	.	.																.	.	.
Template SS confidence
		222	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions