Job Description P24555 Confidence 96.23% Date Thu Jan 5 11:41:42 GMT 2012 Rank 318 Aligned Residues 212 % Identity 13% Template c3greA_ PDB info PDB header:signaling protein,protein binding Chain: A: PDB Molecule:serine/threonine-protein kinase vps15; PDBTitle: crystal structure of saccharomyces cerevisiae vps15 wd2 repeat domain Resolution 1.80 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	.	.	.	.	.	.	.	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																		.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																							.	.	.	.																																																	.	.	.	.	.	.
Template Sequence		I	T	S	S	A	V	S	P	G	E	T	P	Y	L	I	T	G	S	D	Q	G	.	.	.	.	V	I	K	I	W	N	L	K	E	I	I	V	G	E	V	Y	S	S	S	L	T	Y	D	C	S	S	T	V	T	Q	I	T	M	I	P	N	F	D	A	F	A	V	S	S	K	D	G	Q	.	.	.	.	.	.	I
Template Known Secondary structure										S	S	S								T	T	S	.	.	.	.												T	T				S		S						S	S									T	T	S	S							T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																																																	.	.	.	.	.	.
Template SS confidence
		1083	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.					.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.							.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220															.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																											.	.	.
Template Sequence		I	V	L	K	V	N	H	Y	Q	Q	E	S	E	V	K	F	L	N	C	E	C	I	R	K	I	N	L	K	N	F	G	K	N	E	Y	A	V	R	M	R	A	F	V	N	E	E	K	S	L	L	V	A	L	T	N	L	S	.	.	.	R	V	I	I	F	D	I	R	T	L	E	R	L	Q	I	I	E	N	S	P
Template Known Secondary structure												T	T															G	G	G	G	S	S													S	S									T	T	S	.	.	.							T	T	T											G
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		1153	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.				1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	H	G	A	V	S	S	I	C	I	D	E	E	C	C	V	L	I	L	G	T	T	R	G	I	I	D	I	W	D	I	R	F	N	V	L	I	R	S	W	S	F	G	D	H	A	P	I	T	H	V	E	V	C	Q	F	Y	G	K	N	S	V	I	V	V	G	G	S	S	K	T	F	L	T	I	W	N	F	V	K
Template Known Secondary structure		G	G										T	T	S								T	T	S							T	T	T	T							B		T	T											T	T	T		T	T								S	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.
		348	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	V	I	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	C	Q	Y	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		1310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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