Job Description P24555 Confidence 99.17% Date Thu Jan 5 11:41:42 GMT 2012 Rank 134 Aligned Residues 238 % Identity 15% Template c3gffA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:iroe-like serine hydrolase; PDBTitle: crystal structure of iroe-like serine hydrolase (np_718593.1) from2 shewanella oneidensis at 2.12 a resolution Resolution 2.12 Å

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.									.	.	.	.	.	480	.	.	.
Predicted Secondary structure																														.																																			.	.	.	.	.	.	.	.
Query SS confidence																														.																																			.	.	.	.	.	.	.	.
Query Sequence		N	Y	R	S	E	H	L	W	I	V	A	R	D	G	V	E	V	P	V	S	L	V	Y	H	R	K	H	F	.	R	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	G	A	S	I	D	A	D	F	S	F	S	R	L	S	L	L	D	R	G	.	.	.	.	.	.	.	.	F	V	Y	A	I	V	H	V	R
Query Conservation																														.																																			.	.	.	.	.	.	.	.
Alig confidence														.																.																	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation														.																																	.	.	.	.
Template Sequence		E	Y	Q	S	K	R	L	E	S	R	L	L	.	K	E	T	R	E	Y	V	I	A	L	P	E	G	Y	A	Q	S	L	E	A	Y	P	V	V	Y	L	L	D	G	E	D	Q	.	.	.	.	F	D	H	X	A	S	L	L	Q	F	L	S	Q	G	T	X	P	Q	I	P	K	V	I	I	V	G	I	H	N	T	N
Template Known Secondary structure											T	T	T	.	T											T	T	G	G	G	S										S	S					.	.	.	.												T		S	S	S		S	S											S	S
Template Predicted Secondary structure														.																																	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
												484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	G	G	E	L	G	Q	Q	W	Y	E	D	G	K	F	L	K	K	K	N	T	F	N	D	Y	L	.	D	A	C	D	A	L	L	K	L	G	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G	V	A	I	N	Q	R	P	E	L	F	H	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.																											.
Template Conservation
Template Sequence		R	X	R	D	Y	T	P	T	H	T	L	V	L	P	S	G	N	K	G	N	P	Q	Y	Q	H	T	G	G	A	G	R	F	L	D	F	I	E	K	E	L	A	P	S	I	E	S	Q	L	R	T	N	G	I	N	V	L	V	G	H	S	F	G	G	L	V	A	X	E	A	L	R	T	D	R	P	L	F	S	A	Y
Template Known Secondary structure						S		S	S			S	B		T	T	S	S	B			G	G	G	G	G														T									S												T												T	T		S	S		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.								.	.	620	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		I	A	Q	V	P	F	V	D	V	V	T	T	M	L	D	E	S	I	P	L	T	T	G	E	F	E	E	W	G	N	P	Q	D	P	Q	Y	Y	E	Y	M	K	S	Y	S	P	Y	D	N	V	T	A	Q	A	Y	P	H	L	L	V	T	T	G	L	H	D	.	.	.	.	.	.	.	S	Q	V	Q	Y	W	E	P
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	L	D	T	S	L	W	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	P	H	Y	L	T	L	L	E	E	R	V	V	K	G	D	F	K	Q	K	Q	L	F	X	A	I	A	N	N	P	L	S	P	G	F	G	V	S	S	Y	H	K	D	L	N
Template Known Secondary structure					S			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T																S	S											S			T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.																										.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T	D	M	D	S	G	H	G	G	K	S	G	R	F	K	S	Y	E	G	V	A	M	E	Y	A	F	L	V	A	L	A	Q	G	T	L	P	A	T	P	A
Query Conservation
Alig confidence																																	.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		L	A	F	A	D	K	L	T	K	L	A	P	K	G	L	G	F	X	A	K	Y	Y	P	E	E	T	H	Q	S	V	S	.	.	.	.	.	H	I	G	L	Y	D	G	I	R	H	L	F	K	D	F	A	I	D	I	Y	F	S	K	Q
Template Known Secondary structure														T	T									T	T			T	T	T			.	.	.	.	.													G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions