Job Description P24555 Confidence 99.85% Date Thu Jan 5 11:41:42 GMT 2012 Rank 25 Aligned Residues 247 % Identity 13% Template c3fnbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:acylaminoacyl peptidase smu_737; PDBTitle: crystal structure of acylaminoacyl peptidase smu_737 from2 streptococcus mutans ua159 Resolution 2.12 Å

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	R	S	E	H	L	W	I	V	A	R	D	G	V	E	V	P	V	S	L	V	Y	H	R	K	H	F	R	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	G	A	S	I	D	A	D	F	S	F	S	R	L	S	L	L	D	R	G	F	V	Y	A	I	V	H	V	R	G	G	G	E	L	G	Q	Q	W
Query Conservation
Alig confidence													.															.	.	.	.																						.																												.
Template Conservation													.															.	.	.	.																						.																												.
Template Sequence		K	I	P	L	K	S	I	E	V	P	F	.	E	G	E	L	L	P	G	Y	A	I	I	S	E	D	.	.	.	.	K	A	Q	D	T	L	I	V	V	G	G	G	D	T	S	R	E	D	L	F	Y	.	X	L	G	Y	S	G	W	E	H	D	Y	N	V	L	X	V	D	L	P	G	Q	G	K	N	P	N	Q	.
Template Known Secondary structure		S											.	T	T											S	S	.	.	.	.												S	S									.		T							T	T									T	T	S	T	T	G	G	G	G	.
Template Predicted Secondary structure													.															.	.	.	.																						.																												.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	D	G	K	F	L	K	K	K	N	T	F	N	D	Y	L	D	A	C	D	A	L	L	K	L	G	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G	V	A	I	N	Q	R	P	E	L	F	H	G	V	I	A	Q	V	P	F	V	D	V	V	T	T	M	L	D	E	S	I	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																																.
Template Conservation		.	.	.	.	.	.	.	.																																																.
Template Sequence		.	.	.	.	.	.	.	.	G	L	H	F	E	V	D	A	R	A	A	I	S	A	I	L	D	W	Y	Q	A	P	T	E	K	I	A	I	A	G	F	S	G	G	G	Y	F	T	A	Q	A	V	E	K	D	K	R	.	I	K	A	W	I	A	S	T	P	I	Y	D	V	A	E	V	F	R	I	S	F	S	V	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	T					S		S														S	S	S								T	T													T	T	.								S			S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																.
Template SS confidence
										202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		573	.	.	.	.	.	.							580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		T	T	G	E	F	E	E	.	.	.	.	.	.	W	G	N	P	Q	D	P	Q	Y	Y	E	Y	M	K	S	Y	S	P	Y	D	N	V	T	A	Q	A	Y	P	H	L	L	V	T	T	G	L	H	D	S	Q	V	Q	Y	W	E	P	A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																													.
Template Conservation																																											.
Template Sequence		K	V	A	E	V	N	L	N	K	Y	A	W	Q	F	G	Q	V	D	F	I	T	S	V	N	E	V	L	E	Q	A	Q	I	V	D	Y	N	K	I	D	V	P	.	S	L	F	L	V	G	A	G	E	D	S	E	L	X	R	Q	S	Q	V	L	Y	D	N	F	K	Q	R	G	I	D	V	T	L	R	K	F	S	S
Template Known Secondary structure																T	S	S																		G	G	G			S		.							S	S	S																		T	T										T
Template Predicted Secondary structure																																											.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	D	S	G	H	G	G	K	S	G	R	F	K	S	Y	E	G	V	A	M	E	Y	A	F	L	V	A	L	A	Q	G
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		E	S	G	A	D	A	H	C	Q	V	N	N	F	R	L	X	H	Y	Q	.	.	V	F	E	W	L	N	H	I	F	K	K
Template Known Secondary structure		T	T	T			S	G	G	G	G	G	G								.	.										T
Template Predicted Secondary structure																					.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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