Job Description P24555 Confidence 78.03% Date Thu Jan 5 11:41:42 GMT 2012 Rank 382 Aligned Residues 245 % Identity 15% Template c3fm0A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:protein ciao1; PDBTitle: crystal structure of wd40 protein ciao1 Resolution 1.70 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	.	.	.	.	.	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		C	W	F	L	A	W	N	P	A	G	T	L	L	A	S	C	G	G	D	R	.	.	.	.	.	R	I	R	I	W	G	T	E	G	D	S	W	I	C	K	S	V	L	S	E	G	H	Q	R	T	V	R	K	V	A	W	S	P	C	G	N	Y	L	A	S	A	S	F	D	A	T	T	C	I	W	K	K	N	Q	D
Template Known Secondary structure									T	T	S	S							T	T	S	.	.	.	.	.									T	T										S	S		S	S									T	T	S	S							T	T	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
																														195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template Conservation																																																																																	.
Template Sequence		F	E	C	V	T	T	L	E	G	H	E	N	E	V	K	S	V	A	W	A	P	S	G	N	L	L	A	T	C	S	R	D	K	S	V	W	V	W	E	V	D	E	E	D	E	Y	E	C	V	S	V	L	N	S	H	T	Q	D	V	K	H	V	V	W	H	P	S	Q	E	L	L	A	S	A	S	Y	D	D	T	.
Template Known Secondary structure												S	S									T	T	S	S							T	T	S									T	T	S													S									S	S	S	S							T	T	S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.											.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	.	.	.	.	.	.	.	.	.	.	Q	W	E	E	L	I	P	P	R	E	N	I
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																									.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	V	K	L	Y	R	E	E	E	D	D	W	V	C	C	A	T	L	E	G	H	E	S	T	V	W	S	L	A	F	D	P	S	G	Q	R	L	A	S	C	S	D	D	R	T	V	R	I	W	R	Q	Y	L	P	G	N	E	Q	G	V	A	C	S	P	S	W	K	C	I	C	T	L	S	G	F	H	S	R	T
Template Known Secondary structure		.	.								T	T												S	S									T	T	S	S							T	T	S										T	T		T	T																S	S		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.						.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	.	.	.	.	.	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	D	I	A	W	C	Q	L	T	G	A	L	A	T	A	C	G	D	D	A	I	R	V	F	Q	E	D	P	N	S	D	P	Q	Q	P	T	F	S	L	T	A	H	L	H	Q	A	H	S	Q	D	V	N	C	V	A	W	N	P	K	E	P	G	L	L	A	S	C	S	D
Template Known Secondary structure									T	T	T								T	T	S									T	T	S		T	T	S										T	T	S	S	S	S									S	S	S	T	T							T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions