Job Description P24555 Confidence 98.29% Date Thu Jan 5 11:41:42 GMT 2012 Rank 247 Aligned Residues 269 % Identity 9% Template c3fgbB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein q89zh8_bactn; PDBTitle: crystal structure of the q89zh8_bactn protein from2 bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr289b. Resolution 2.00 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																	.																									.	.
Query SS confidence																	.																									.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	.	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	.	.	E	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A
Query Conservation																	.																									.	.
Alig confidence																	.																									.	.																												.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		P	S	Y	L	V	P	S	A	D	G	K	F	I	Y	A	V	S	E	F	S	N	E	Q	A	A	A	N	A	F	A	F	N	K	E	E	G	T	F	R	L	L	N	T	Q	K	T	G	G	E	D	P	C	Y	I	I	T	N	G	S	N	V	V	T	A	N	Y	S	G	G	.	.	.	.	.	S	I	S	V	F	P
Template Known Secondary structure									S	S	S	S									S	S	T	T										T	T	T	T											S	S	S									S	S							T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260											.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	T	P	A	S	Q	D	K	L	I	Y	E	.	.	.	.	.	.	.	.	.	.	.	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	.	.	.	.	.	.	.	.	.	.	P	F	V	F
Query Conservation															.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	K	D	G	S	L	L	P	A	S	E	V	V	K	F	K	G	S	G	A	D	K	E	R	Q	E	K	P	H	L	H	C	V	R	I	T	P	D	G	K	Y	L	F	A	D	D	L	G	T	D	Q	I	H	K	F	I	V	N	P	N	A	K	A	D	N	E	D	V	F	L	K	E	G	S	P	A	S	Y	K
Template Known Secondary structure		B		T	T	S		B		S												S	S	T	T	T		S	S										T	T	S	S							T	T	T	T									T	T			T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340
Predicted Secondary structure																																																			.	.	.																						.
Query SS confidence																																																			.	.	.																						.
Query Sequence		L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	.	.	.	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	.	R	G	L	T	S	L
Query Conservation																																																			.	.	.																						.
Alig confidence																																																			.	.	.																						.
Template Conservation
Template Sequence		V	E	A	G	S	G	P	R	H	L	T	F	A	P	N	G	S	Y	A	Y	L	I	N	E	L	S	G	T	V	I	A	F	E	Y	N	D	G	E	L	K	E	I	Q	T	I	A	A	D	T	V	G	A	K	G	S	G	D	I	H	I	S	P	D	G	K	F	L	Y	A	S	N	R	L	K	A	D	G	L	A	I
Template Known Secondary structure				T	T										T	T	S	S							T	T	T										T	T										S		S	S												T	T	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q	T
Query Conservation
Alig confidence																										.																					.
Template Conservation																										.																					.
Template Sequence		F	S	I	H	P	E	N	G	X	L	T	K	V	G	Y	Q	L	T	G	I	H	P	R	N	.	F	I	I	T	P	N	G	K	Y	L	L	V	A	C	R	D	S	N	V	I	.	Q	V	Y	E	R	D	T	D	T	G	L	L	T	D	I	R	K	D
Template Known Secondary structure						T	T	T												S	S					.					T	T	S								T	T	T	T			.							T	T	T							S
Template Predicted Secondary structure																										.																					.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions