Job Description P24555 Confidence 95.99% Date Thu Jan 5 11:41:42 GMT 2012 Rank 321 Aligned Residues 236 % Identity 6% Template c3dwlH_ PDB info PDB header:structural protein Chain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	.	.	.	.	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H
Query Conservation																																												.	.	.	.
Alig confidence																.	.	.	.	.																								.	.	.	.																									.	.	.	.	.	.
Template Conservation																.	.	.	.	.																																																				.	.	.	.	.	.
Template Sequence		S	Y	E	H	A	F	N	S	Q	R	T	E	F	V	.	.	.	.	.	T	T	T	A	T	N	Q	V	E	L	Y	E	Q	D	G	N	G	W	K	H	A	R	T	F	S	D	H	D	K	I	V	T	C	V	D	W	A	P	K	S	N	R	I	V	T	C	S	Q	D	R	N	.	.	.	.	.	.	A	Y	V	Y
Template Known Secondary structure			S						S	S	S	S				.	.	.	.	.				S	S	S		B							T	T								B				S	S									T	T	T								T	T	S	S	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.																																																				.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	.	.	.	.	.	.	.	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		T	W	K	Q	T	.	.	.	.	.	.	L	V	L	L	R	L	N	R	A	A	T	F	V	R	W	S	P	N	E	D	K	F	A	V	G	S	G	A	R	V	I	S	V	C	Y	F	E	W	W	V	S	K	H	L	K	R	P	L	R	S	T	I	L	S	L	D	W	H	P	N	N	V	L	L	A	A	G	C	A
Template Known Secondary structure							.	.	.	.	.	.							S	S									T	T	S	S							S	S	S							B			B							S	S			S									T	T	S	S							S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	.	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		D	R	K	A	Y	V	L	S	A	Y	V	R	D	V	D	K	P	E	A	S	V	W	G	S	R	L	P	F	N	T	V	C	A	E	Y	P	S	G	G	W	V	H	A	V	G	F	S	P	S	G	N	A	L	A	Y	A	G	H	D	S	S	V	T	I	A	Y	P	S	A	P	E	Q	P	P	R	A	L	I	T	V
Template Known Secondary structure		S	S										T	T						S		S	S		S														S	S	S								T	T	S	S							T	T	T									S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	S	Q	L	P	L	R	S	L	L	W	A	N	E	S	A	I	V	A	A	G	Y	N	Y
Template Known Secondary structure				S	S	S										T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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