Job Description P24555 Confidence 98.15% Date Thu Jan 5 11:41:42 GMT 2012 Rank 258 Aligned Residues 240 % Identity 8% Template c3dm0A_ PDB info PDB header:sugar binding protein,signaling protein Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with PDBTitle: maltose binding protein fusion with rack1 from a. thaliana Resolution 2.40 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	.	.	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I
Query Conservation																																												.	.
Alig confidence																						.	.	.	.	.																		.	.																									.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																																												.	.	.	.	.	.
Template Sequence		V	E	D	V	V	L	S	S	D	G	Q	F	A	L	S	G	S	W	D	G	.	.	.	.	.	E	L	R	L	W	D	L	A	A	G	V	S	T	R	R	F	V	G	H	T	K	D	V	L	S	V	A	F	S	L	D	N	R	Q	I	V	S	A	S	R	D	R	T	.	.	.	.	.	.	I	K	L	W	N	T
Template Known Secondary structure									T	T	S	S							T	T	S	.	.	.	.	.							T	T	T	T										S	S									T	T	S	S							T	T	S		.	.	.	.	.	.						T
Template Predicted Secondary structure																						.	.	.	.	.																																												.	.	.	.	.	.
Template SS confidence
		1066	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.						.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.							.	1130	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		L	G	E	C	K	Y	T	I	S	E	G	G	E	G	H	R	D	W	V	S	C	V	R	F	S	P	N	T	L	Q	P	T	I	V	S	A	S	W	D	K	T	.	V	K	V	W	N	L	S	N	C	K	L	R	S	T	L	A	G	H	T	G	Y	V	S	T	V	A	V	S	P	D	G	S	L	C	A	S	G	G
Template Known Secondary structure		T	S								S	S	T	T	S		S	S									S		S	S	S								T	T	S		.						T	T	T											S	S									T	T	S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		1135	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.		.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	.	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A
Query Conservation																																																																	.
Alig confidence			.	.	.	.																								.	.	.																					.	.											.
Template Conservation			.	.	.	.																								.	.	.																					.	.
Template Sequence		K	.	.	.	.	D	G	V	V	L	L	W	D	L	A	E	G	K	K	L	Y	S	L	E	A	N	S	V	.	.	.	I	H	A	L	C	F	S	P	N	R	Y	W	L	C	A	A	T	E	H	G	.	.	I	K	I	W	D	L	E	S	K	S	I	V	E	D	L	K	V	D	L	K	K	V	I	Y	C	T	S
Template Known Secondary structure		T	.	.	.	.	T	S	B						T	T	T	T							B		S	S		.	.	.								S	S	S	S							T	T		.	.						T	T	T	T
Template Predicted Secondary structure			.	.	.	.																								.	.	.																					.	.
Template SS confidence
		1214					.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.				.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.			.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		L	N	W	S	A	D	G	S	T	L	F	S	G	Y	T	D	.	.	.	.	G	V	I	R	V	W	G	I
Template Known Secondary structure						T	T	S	S							T	T	.	.	.	.	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		1301	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.					.	.	.	1320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions